Table 3 of Wistow, Mol Vis 2002; 8:205-220.


Table 3. Growth factors and related proteins represented in the cs sequence collection

This listing shows growth factors, cytokines and receptors identified in the RPE/choroid sequence collection. The listing is derived from GRIST processing as in Table 1 and Table 2. Sequences are listed in alphabetic order in this table.

Description                                     Genbank           Unigene   Chromosome       #
---------------------------------------------   ---------------   -------   --------------   --
angiopoietin 1                                  NM_001146         2463      8q22.3-q23        2
bone morphogenetic protein 5                    XM_004361         1104      6                 2
bone morphogenetic protein 7 (osteogenic        M60316            170195    20                1
  protein 1)
bone morphogenetic protein receptor, type II    XM_010854         53250     2q33-q34          1
chemokine (C-X-C motif), receptor 4 (fusin)     L01639            89414     2q21              1
connective tissue growth factor                 AF127918          75511     6q23.1            3
endothelial cell growth factor 1                M58602            73946     22q13.33          1
  (platelet-derived)
epidermal growth factor (β-urogastrone)         X04571            2230      4q25              1
epidermal growth factor receptor                NM_005228         77432     7p12              1
epidermal growth factor receptor pathway        XM_001380         79095     1p32              2
  substrate 15
epidermal growth factor receptor pathway        NM_001981         79095     1p32              1
  substrate 15
epidermal growth factor receptor pathway        NM_004447         2132      12q23-q24         2
  substrate 8
fgf (acidic) intracellular binding protein      XM_006504         7768      11q13.1           1
fibroblast growth factor 10? (similar to        AF213396                                      1
  ovine FGF-10)
fibroblast growth factor 12B                                      326401    3                 1
fibroblast growth factor 2 (basic)              J04513            284244    4q26-q27          2
fibroblast growth factor receptor 1             M63887            748       8p11.2-p11.1      3
fibroblast growth factor receptor 2             NM_000141         278581    10q26             1
fibroblast growth factor receptor 3             M58051            1420      4p16.3            1
fibroblast growth factor receptor 4             NM_002011         165950    5q35.1-qter       1
G protein-coupled receptor, family C, group     AJ276102          58014     17q25             1
  5, C
growth factor receptor-bound protein 2 (GRB2)   XM_008198         296381    17q24-q25         3
growth factor, erv1-like (augmenter of liver    NM_005262         27184     16p13.3-p13.12    1
  regeneration)
IK cytokine, down-regulator of HLA II           AF182645          8024      5q                2
insulin-like growth factor 2 (somatomedin A)    X07868            251664    11p15.5           2
insulin-like growth factor 2 receptor           J03528            76473     6q26              1
insulin-like growth factor binding protein 3    M35878            77326     7p13-p12          1
  (IGFBP3)
insulin-like growth factor binding protein 4                      1516      17q12-q21.1       1
  (IGFBP4)
insulin-like growth factor binding protein 5    AF055033/L27560   107169    2q33-q36         39
  (IGFBP5)
insulin-like growth factor binding protein 6    XM_012161         274313    12q13             3
  (IGFBP6)
insulin-like growth factor binding protein 7    NM_001553         119206    4q12              6
  (IGFBP7)
interleukin 11 receptor, α                      NM_004512         64310     9p13              1
interleukin 13 receptor, α 1                    NM_001560         285115    X                 2
interleukin 14                                  AF070546          83004     1                 2
interleukin 6 signal transducer (oncostatin M                     82065     5q11              2
  receptor)
interleukin-1 receptor-associated kinase 1      L76191            182018    Xq28              1
latent transforming growth factor β             Z37976            83337     14q24             5
  binding protein 2
latent transforming growth factor β             AF135960          289019    11q12             3
  binding protein 3
latent transforming growth factor β             XM_008868         85087     19q13.1-q13.2     2
  binding protein 4
lymphotoxin β receptor (TNFR superfamily,       NM_002342         1116      12p13             2
  3)
met proto-oncogene (hepatocyte growth factor    U08818            285754    7q31              4
  receptor)
opioid growth factor receptor                   AF172453          67896     20q13.3           1
PEDF                                            M76979            173594    17p13.1          15
platelet derived growth factor C/fallotein      AF091434          43080     4                 1
platelet-derived growth factor receptor, α      M21574            74615     4q11-q13          1
platelet-derived growth factor receptor, β      M21616            76144     5q31-q32          1
pleiotrophin                                    M57399            44        7q33-q34          1
pre-B-cell colony-enhancing factor                                239138    7q22.1-7q31.33    1
small inducible cytokine subfamily D1           NM_002996         80420     16q13             4
  (neurotactin)
transforming growth factor, β 3                 J03241            2025      14q24             3
transforming growth factor, β receptor II       XM_003094         82028     3p22              2
  (70-80kD)
transforming growth factor, β receptor III      L07594            79059     1p33-p32          1
  (betaglycan)
transforming growth factor, β-induced, 68kD     M77349            118787    5q31              4
tumor necrosis factor (ligand) superfamily,     AF055872          26401     17p13             1
  member 12
tumor necrosis factor receptor superfamily,     AF012535          51233     8p22-p21          1
  member 10b
tumor necrosis factor receptor superfamily,     NM_003820         279899    1p36.3-p36.2      3
  member 14
tumor necrosis factor receptor superfamily,     NM_001250         25648     20q12-q13.2       1
  member 5
vascular endothelial growth factor              AF024710          73793     6p12              1
vascular endothelial growth factor receptor     XM_007175         138671    13q12             3
  FLT1

Wistow, Mol Vis 2002; 8:205-220 <http://www.molvis.org/molvis/v8/a27/>
©2002 Molecular Vision <http://www.molvis.org/molvis/>
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