Table 1 of
Wistow, Mol Vis 2002;
8:205-220.Table 1 of
Wistow, Mol Vis 2002;
8:205-220.
Table 1. The thirty most abundant transcripts in the RPE/choroid collection
Sequences are clustered and identified by GRIST. A representative entry from GenBank and the current Unigene cluster are shown. The chromosome location is shown and the number of clones in each cluster is listed. This is available through NEIBank, but note that data will be subject to regular updates and may therefore change.
Rank Description GenBank UniGene Chromosome # ---- ---------------------------------- --------- ------- ------------- --- 1 elongation factor 1 α 1 NM_001402 181165 1 100 2 glutathione peroxidase 3 NM_002084 172153 5q23 49 3 alpha gene AF203815 11 41 4 prostaglandin D2 synthase NM_000954 8272 9q34.2-q34.3 34 5 vimentin M25246 2064 10p13 31 6 TIMP3 AF035289 245188 22q12.3 30 7 IGFBP5 L27560 107169 12 29 8 myosin, heavy polypeptide 11 AB020673 78344 16p13.13 29 9 Pmel 17 (silver homolog) M77348 95972 12q13-q14 27 10 β-actin AK025375 288061 7p15-p12 23 11 prosaposin D00422 78575 10q21-q22 22 12 clusterin (apolipoprotein J) M64722 75106 8p21-p12 22 13 ribosomal protein L3 NM_000967 119598 22q12.1-q12.3 21 14 tyrosinase-related protein NM_000550 75219 9p23 20 15 serpin G1 M13656 151242 11q12-q13.1 20 16 CD74 antigen K01144 84298 5q32 19 17 γ-actin 1 NM_001614 14376 17q25 19 18 ceruloplasmin M13536 288966 3q23-q25 18 19 transglutaminase M98478 8265 20q12 16 20 ferritin heavy chain AF088851 62954 11q13 16 21 pigment epithelium-differentiation M76979 173594 17p13.1 15 factor (PEDF) 22 β-2-microglobulin AY007153 75415 15q21-q22.2 15 23 oculoglycan/opticin AF161702 241413 1q32 15 24 GAPDH AK026525 169476 12p13 15 25 heat shock 90kD protein 1, β AL136543 74335 6p12 14 26 heat shock 70kD protein 8 NM_006597 180414 11q23.3-q25 13 27 SPARC/osteonectin J03040 111779 5q31.3-q32 13 28 polyubiquitin UbC AB009010 183704 12q24.3 12 29 glutamine synthase NM_002065 170171 1q31 11 30 pyruvate kinase M23725 198281 15q22 11 |