Table 1 of
Wistow, Mol Vis 2002;
8:185-195.
Table 1. The "top 25" clones in the un-normalized iris cDNA library bx
Clusters are arranged by abundance. This list is an edited detail from the output of the clustering procedure GRIST. Representative GenBank entries are shown, along with the appropriate Unigene, chromosomal location, and the number of ESTs identified.
Rank Description Gene ID UniGene Chromosome # ---- --------------------------------------- --------- ------- ------------- -- 1 clusterin (apolipoprotein J) M64722 75106 8p21-p12 38 2 elongation factor 1 α 1 BC001412 181165 6q14 36 3 glutathione peroxidase 3 (plasma) D00632 172153 5q23 36 4 ribosomal protein L3 (RPL3) XM_009998 119598 22q12.1-q12.3 14 5 GADPH AF261085 169476 12p13 13 6 opticin/oculoglycan XM_001780 241413 1q31 13 7 prostaglandin D2 synthase XM_005431 8272 9q34.2-q34.3 12 8 vimentin BC000163 2064 10p13 12 9 Serpin G1 XM_006339 151242 11q12-q13.1 10 10 aldolase A X05236 273415 16q22-q24 10 11 actin β BC001301 288061 7p15-p12 9 12 myosin regulatory light chain 2 XM_009501 9615 20 9 13 ribosomal protein L4 BC001365 286 15q 9 14 Pmel (silver homolog) BC001414 95972 12q13-q14 8 15 cofilin 1 (non-muscle) NM_005507 180370 11q13 8 16 α-tubulin AK026516 272897 2q 8 17 gelsolin NM_000177 290070 9q33 7 18 ribosomal protein L13a BC000514 7 19 insulin-like growth factor binding NM_001553 119206 4q12 7 protein 7 (IGFBP7) 20 tissue inhibitor of metalloproteinase 3 XM_009943 245188 22q12.3 6 (TIMP3) 21 prothymosin α BC003510 250655 2q35-q36 6 22 MHC class II antigen γ chain K01144 84298 5q32 6 23 MHC class I lymphocyte antigen (HLA-A AK027084 181244 6p21.3 6 2402) 24 ATPase, H+ transporting, lysosomal M62762 76159 16p13.3 6 (vacuolar proton pump) 16kD 25 ubiquitin C AB009010 183704 12q24.3 6 |