Figure 3 of Boulanger, Mol Vis 2001; 7:283-287.


Figure 3. Intron/exon boundaries of the mouse Rpe65 gene

Each exon (numbered from 1 to 14) is listed and the length in base pairs (bp) given on the left hand side. Each intron (given alphabetically A to M) is listed and the length in bp given after the letter designation. Exonic sequence (with translation underneath) is given as uppercase, while intronic sequence is depicted as lowercase.

 Exon                          Intron                        Exon

No.   bp                                  (No.; bp)                                 No.

 1    65   AAA ATG TCT ATC CA/gtaagtatct--(A; 1072)-cgaatttcag/A ATT GAA CAC CCT-----2
                M   S   I   Q                                     I   E   H   P

 2    83   GCT CAT GTC ACA G/gttggtctca---(B; 1118)-tttgctgcag/GC AGG ATT CCC CTC----3
            A   H   V   T                                      G   R   I   P   L

 3   151   ACA TAC CAC AGA AG/gtaagtccat--(C; 2680)-tattcttcag/A TTC ATC CGC ACT-----4
            T   Y   H   R   R                                     F   I   R   T

 4   108   AAT ATA TTT TCC AG/gttaatgaaa----(D; 90)-gcttctgcag/G TTT TTT TCT TAC-----5
            N   I   F   S   R                                     F   F   S   Y

 5   142   GAG ACA ATT AAG CAG/gtaggatatt-(E; 1685)-cattctacag/GTT GAT CTT TGC AAC---6
            E   T   I   K   Q                                   V   D   L   C   N

 6   148   CCA CTG AAA GCA G/gtgaggttgt---(F;~8500)-tctatttcag/AC AAG GAA GAT CCA----7
            P   L   K   A                                      D   K   E   D   P

 7    82   TCT TAC GTA CAC AG/gtaatttaaa---(G; 218)-ttttgaacag/T TTT GGT CTG ACT-----8
            S   Y   V   H   S                                     F   G   L   T

 8   133   AAT GAA AGC ATG GGG/gtatgtctga---(H; 95)-acttttccag/GTT TGG CTT CAT GTT---9
            N   E   S   M   G                                   V   W   L   H   V

 9   140   TGT TGC TGG AAA GG/gtaaaaaatt---(I; 746)-gttttcacag/G TTT GAA TTT GTT----10
            C   C   W   K   G                                     F   E   F   V

10   130   TTG ACA ATT GAC AAG/gtaactttct-(J;~6000)-tctttcttag/GTC GAC ACA GGC AGA--11
            L   T   I   D   K                                   V   D   T   G   R

11   115   GGG CCT CGT CAA G/gtaagatgat-----(K; 88)-tattttaaag/CC TTT GAA TTT CCT---12
            G   P   R   Q                                      A   F   E   F   P

12    95   TTT GTT CCT GAC AAG/gtaataagca--(L; 103)-tcataagcag/CTC TGT AAG CTG AAC--13
            F   V   P   D   K                                   L   C   K   L   N

13   112   GAA GAA GAT GAT G/gtaatggaat---(M;~1270)-taattaacag/GT GTG GTT CTG AGT---14
            E   E   D   D                                      G   V   V   L   S

Boulanger, Mol Vis 2001; 7:283-287 <http://www.molvis.org/molvis/v7/a40/>
©2001 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535