Table 3 of Zhang, Mol Vis 2014; 20:56-72.


Table 3. Contrasts for selecting Smarca4-regulated RPE genes.

Question Contrast Number of genes Appendix
1. Gene differentially expressed in WT RPE H0: TRPE=0 6306 -
2. Gene differentially expressed in smarca4 RPE H0: TRPE + M*TRPE=0 4851 -
3. Gene differentially expressed in WT OR smarca4 RPE H0: TRPE=0 OR
H0: TRPE + M*TRPE=0 8536 -
4. Smarca4-regulated RPE genes that are differentially expressed in RPE H0: M + M*TRPE=0
AND
(H0: TRPE=0 OR
H0: TRPE + M*TRPE=0) 591 5