Table 4 of
Rogojina, Mol Vis 2003;
9:482-496.Table 4 of
Rogojina, Mol Vis 2003;
9:482-496.
Table 4. mRNA fold changes relative to protein Levels
The expression levels of selected proteins are compared to mRNA levels as defined by the Atlas Glass platform, the Affymetrix platform (HG-U95Av2 chips), and real-time RT-PCR. The fold changes in protein levels detected by immunoblot were compared to the fold changes in mRNA. When protein levels are compared to the Affymetrix data, seven of the proteins (*) change in the same direction as the mRNA and 4 proteins change in the opposite direction. For the Atlas Glass platform none of five mRNA levels was similar to the protein level change.
Gene Fold change Fold change Fold change number Title Affymetrix Atlas Western blot ------ ----------------- ----------- ----------- ------------ 1 Actinin, alpha 1 3.1* -1 1.2* 2 CD81 antigen 1.6* 1 1.5* 3 Connexin 43 4.1 -1.2 -8.5 4 Integrin, alpha 2 -2.8 no gene 2.4 5 Integrin, alpha 3 3.5* -1.5 2.2* 6 Integrin, alpha 4 2.6* no gene 1.7* 7 Integrin, alpha 5 -2.0* no gene -1.2* 8 Integrin, alpha V 2.5* -1.1 1.7* 9 Integrin, beta 1 1.1 no gene 1.5 10 Integrin, beta 7 1.4* no gene 1.3* 11 Integrin, alpha 1 -1.3 no gene 1.1 |