Table 7 of Wride, Mol Vis 2003; 9:360-396.


Table 7. Additional novel and uncharacterized genes expressed in the lens confirmed by RT-PCR

Additional novel and uncharacterized genes expressed in the lens samples showing the accession number, the UniGene number, the gene identity, protein similarities and the normalized intensity values from the microarray for each sample.

             UniGene                                                                    New    7 day
Accession    cluster                                                           Adult   born     old
 number      number           Identity             Protein similarities        lens    lens    lens
---------   ---------   --------------------   -----------------------------   -----   -----   -----
AI414484    Mm.11535    RIKEN cDNA             H. sapiens: ref:NP_079506.1 -    1.94    2.01    1.96
                        0710008A13 gene        hypthetical protein PRO2389
                                               [Homo sapiens] 95%/416 aa and
                                               M. musculus: ref:NP_543124.1
                                               - Bmp2-induced gene [Mus
                                               musculus] 22%/347 aa
AI426191    Mm.27900    RIKEN cDNA             None                             4.15    2.63    3
                        1810013D10 gene
AI425997    Mm.23689    ESTs, Weakly similar   H. sapiens: pir:T00037 -         3.95    2.3     2.59
                        to T00037              T00037 hypothetical protein
                        hypothetical protein   KIAA0284 - human (fragment)
                        KIAA0284 - human       70%/279 aa
                        (fragment)
                        [H. sapiens]
AI426997    Mm.27981    ESTs                   None                             2.54    1.26    1.25
AI451475    Mm.31834    RIKEN cDNA             H. sapiens: sp:O60832 -          3.72    1.36    1.17
                        3010021M21 gene        DKC1_HUMAN Dyskerin
                                               (Nucleolar protein NAP57;
                                               CBF5 homolog) 98%/286 aa
AI464327    None        EST
AI465543    Mm.182328   RIKEN cDNA             H. sapiens: sp:Q9Y3D8 -          4.29    2.24    2.52
                        4921516M08 gene        CGD7_HUMAN Protein CGI-137
                                               (Protein AD-004) 88%/171 aa
AI661325    Mm.1558     RIKEN cDNA             H. sapiens: ref:NP_056199.1 -    4.2     2.99    3.12
                        4921518A06 gene        IDN3 protein, isoform B [Homo
                                               sapiens] 95%/269 aa
AI323902    Mm.46397    RIKEN cDNA             M. musculus: ref:NP_080940.1     1.54    3.33    1.59
                        3100002B05 gene        - RIKEN cDNA 3100002B05 [Mus
                                               musculus] 100%/832 aa
                                               contains a Vps53-like,
                                               N-terminal domain. Vps53
                                               complexes with Vps52 and
                                               Vps54 to form a multi-
                                               subunit complex involved in
                                               regulating membrane
                                               trafficking events
AI427110    Mm.254219   RIKEN cDNA             H. sapiens: pir:T46316 -        42.84   54.9    70.49
                        2810455F06 gene        T46316 hypothetical protein
                                               DKFZp434N1511.1 - human
                                               (fragment) 72%/155 aa and
                                               M. musculus: pir:T42713 -
                                               T42713 ankyrin 3, splice form
                                               1 - mouse 34%/130 aa
AI427165    Mm.189729   Mus musculus 16 days   H. sapiens: ref:NP_060803.1 -    4.47    3.44    2.78
                        embryo head cDNA,      hypothetical protein FLJ20666
                        RIKEN full-length      [Homo sapiens] 92%/258 aa
                        enriched library,
                        clone:C130058G02
                        product:hypothetical
                        protein, full insert
                        sequence.
AI428574    Mm.30046    ESTs                   None                             5.61    4.02    4.56
AI450717    Mm.32347    ESTs                   None                             1.48    0.45    0.37
AI413436    Mm.86511    Mus musculus 16 days   None                             1.3     0.41    0.44
                        embryo head cDNA,
                        RIKEN full-length
                        enriched library,
                        clone:C130043L22
                        product:unknown EST,
                        full insert
                        sequence.
AI414993    Mm.227455   Mus musculus, clone    M. musculus: ref:NP_291046.1     1.32    0.39    0.41
                        IMAGE:5372918, mRNA    - DNA segment, Chr 11, KL
                                               Mohlke 34; similar to EAP30
                                               subunit of ELL complex [Mus
                                               musculus] 98%/73 aa
AI447897    Mm.30727    ESTs                   None                             0.2     0.2     0.18
AI465228    Mm.1591     RIKEN cDNA             C.elegans: ref:NP_497450.1 -     0.89    0.33    0.31
                        2310035O07 gene        Y22D7AR.1.p [Caenorhabditis
                                               elegans] 32%/152 aa
AI429624    Mm.29326    ESTs                                                    1.16    0.3     0.31

Wride, Mol Vis 2003; 9:360-396 <http://www.molvis.org/molvis/v9/a50/>
©2003 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535