Table 7 of
Wride, Mol Vis 2003;
9:360-396.Table 7 of
Wride, Mol Vis 2003;
9:360-396.
Table 7. Additional novel and uncharacterized genes expressed in the lens confirmed by RT-PCR
Additional novel and uncharacterized genes expressed in the lens samples showing the accession number, the UniGene number, the gene identity, protein similarities and the normalized intensity values from the microarray for each sample.
UniGene New 7 day
Accession cluster Adult born old
number number Identity Protein similarities lens lens lens
--------- --------- -------------------- ----------------------------- ----- ----- -----
AI414484 Mm.11535 RIKEN cDNA H. sapiens: ref:NP_079506.1 - 1.94 2.01 1.96
0710008A13 gene hypthetical protein PRO2389
[Homo sapiens] 95%/416 aa and
M. musculus: ref:NP_543124.1
- Bmp2-induced gene [Mus
musculus] 22%/347 aa
AI426191 Mm.27900 RIKEN cDNA None 4.15 2.63 3
1810013D10 gene
AI425997 Mm.23689 ESTs, Weakly similar H. sapiens: pir:T00037 - 3.95 2.3 2.59
to T00037 T00037 hypothetical protein
hypothetical protein KIAA0284 - human (fragment)
KIAA0284 - human 70%/279 aa
(fragment)
[H. sapiens]
AI426997 Mm.27981 ESTs None 2.54 1.26 1.25
AI451475 Mm.31834 RIKEN cDNA H. sapiens: sp:O60832 - 3.72 1.36 1.17
3010021M21 gene DKC1_HUMAN Dyskerin
(Nucleolar protein NAP57;
CBF5 homolog) 98%/286 aa
AI464327 None EST
AI465543 Mm.182328 RIKEN cDNA H. sapiens: sp:Q9Y3D8 - 4.29 2.24 2.52
4921516M08 gene CGD7_HUMAN Protein CGI-137
(Protein AD-004) 88%/171 aa
AI661325 Mm.1558 RIKEN cDNA H. sapiens: ref:NP_056199.1 - 4.2 2.99 3.12
4921518A06 gene IDN3 protein, isoform B [Homo
sapiens] 95%/269 aa
AI323902 Mm.46397 RIKEN cDNA M. musculus: ref:NP_080940.1 1.54 3.33 1.59
3100002B05 gene - RIKEN cDNA 3100002B05 [Mus
musculus] 100%/832 aa
contains a Vps53-like,
N-terminal domain. Vps53
complexes with Vps52 and
Vps54 to form a multi-
subunit complex involved in
regulating membrane
trafficking events
AI427110 Mm.254219 RIKEN cDNA H. sapiens: pir:T46316 - 42.84 54.9 70.49
2810455F06 gene T46316 hypothetical protein
DKFZp434N1511.1 - human
(fragment) 72%/155 aa and
M. musculus: pir:T42713 -
T42713 ankyrin 3, splice form
1 - mouse 34%/130 aa
AI427165 Mm.189729 Mus musculus 16 days H. sapiens: ref:NP_060803.1 - 4.47 3.44 2.78
embryo head cDNA, hypothetical protein FLJ20666
RIKEN full-length [Homo sapiens] 92%/258 aa
enriched library,
clone:C130058G02
product:hypothetical
protein, full insert
sequence.
AI428574 Mm.30046 ESTs None 5.61 4.02 4.56
AI450717 Mm.32347 ESTs None 1.48 0.45 0.37
AI413436 Mm.86511 Mus musculus 16 days None 1.3 0.41 0.44
embryo head cDNA,
RIKEN full-length
enriched library,
clone:C130043L22
product:unknown EST,
full insert
sequence.
AI414993 Mm.227455 Mus musculus, clone M. musculus: ref:NP_291046.1 1.32 0.39 0.41
IMAGE:5372918, mRNA - DNA segment, Chr 11, KL
Mohlke 34; similar to EAP30
subunit of ELL complex [Mus
musculus] 98%/73 aa
AI447897 Mm.30727 ESTs None 0.2 0.2 0.18
AI465228 Mm.1591 RIKEN cDNA C.elegans: ref:NP_497450.1 - 0.89 0.33 0.31
2310035O07 gene Y22D7AR.1.p [Caenorhabditis
elegans] 32%/152 aa
AI429624 Mm.29326 ESTs 1.16 0.3 0.31
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