Figure 1 of Darden, Mol Vis 2003; 9:191-199.


Figure 1. Xenopus SWS2, P434 DNA and predicted nucleotide sequences

Nucleotide and deduced amino acid sequence of the Xenopus green rod SWS2, P434 opsin. The nucleotide sequence is shown on the lower lines with the deduced amino acid sequence on the upper lines. GenBank accession number AY177405.

   1              MetSerLysGlyArgProAspLeuArgMetGluMetProAspGluPhe   16
   1  CCAACATCAAGGATGAGTAAAGGCCGTCCAGACCTGAGGATGGAGATGCCAGATGAATTC   60

  17  TyrValProIleProLeuGluThrThrAsnIleSerSerLeuSerProPheLeuValPro   36
  61  TACGTCCCCATCCCCTTGGAGACAACTAACATAAGCTCTCTTAGTCCTTTCCTGGTACCC   120

  37  GlnThrHisLeuGlyThrProGlyIlePheMetSerIleSerAlaPheMetLeuPheThr   56
 121  CAAACTCATCTGGGGACCCCTGGCATATTCATGAGCATATCAGCCTTTATGTTATTCACA   180

  57  IleIlePheGlyPheProLeuAsnLeuLeuThrIleIleCysThrValLysTyrLysLys   76
 181  ATTATTTTTGGGTTTCCCCTCAACCTCCTAACTATCATCTGTACTGTCAAGTACAAAAAG   240

  77  LeuArgSerHisLeuAsnTyrIleLeuValAsnLeuAlaValAlaAsnLeuIleValIle   96
 241  TTGCGTTCCCACCTCAACTACATCCTGGTAAATCTGGCTGTTGCCAACCTCATAGTTATC   300

  97  CysPheGlySerThrThrAlaPheTyrSerPheSerGlnMetTyrPheSerLeuGlyThr   116
 301  TGCTTTGGCTCCACCACTGCCTTCTACAGCTTCTCTCAGATGTACTTCTCTTTGGGTACT   360

 117  LeuAlaCysLysIleGluGlyPheThrAlaThrLeuGlyGlyIleIleGlyLeuTrpSer   136
 361  TTGGCATGCAAAATAGAAGGTTTTACCGCCACATTGGGAGGAATAATAGGCCTTTGGTCC   420

 137  LeuAlaValValAlaPheGluArgPheLeuValIleCysLysProMetGlyAsnPheThr   156
 421  TTGGCAGTGGTGGCTTTTGAGAGGTTTCTGGTGATCTGTAAACCAATGGGAAACTTTACA   480

 157  PheArgGluSerHisAlaValLeuGlyCysIleLeuThrTrpValIleGlyLeuValAla   176
 481  TTCAGGGAAAGCCATGCGGTCCTAGGCTGTATACTCACCTGGGTAATTGGTCTTGTGGCG   540

 177  AlaIleProProLeuLeuGlyTrpSerArgTyrIleProGluGlyLeuGlnCysSerCys   196
 541  GCAATCCCCCCATTGCTAGGATGGAGCAGGTACATCCCAGAAGGCCTTCAGTGCTCATGT   600

 197  GlyProAspTrpTyrThrValAsnAsnLysTrpAsnAsnGluSerTyrValLeuPheLeu   216
 601  GGACCAGACTGGTACACTGTGAACAACAAGTGGAATAACGAATCATATGTTCTTTTCCTC   660

 217  PheCysPheCysPheGlyPheProLeuAlaIleIleValPheSerTyrGlyArgLeuLeu   236
 661  TTCTGCTTCTGCTTTGGATTCCCTCTTGCAATCATTGTGTTTTCCTATGGACGCCTGTTG   720

 237  LeuAlaLeuHisAlaValAlaLysGlnGlnGluGlnSerAlaThrThrGlnLysAlaGlu   256
 721  CTCGCCCTTCATGCCGTTGCTAAGCAGCAGGAGCAGTCGGCAACTACTCAGAAAGCAGAG   780

 257  ArgGluValThrArgMetValIleValMetValValGlyPheLeuValCysTrpLeuPro   276
 781  CGCGAGGTTACCAGGATGGTGATTGTTATGGTTGTTGGCTTCCTGGTTTGCTGGCTTCCC   840

 277  TyrAlaSerPheAlaLeuTrpAlaValThrHisArgGlyGluLeuPheAspLeuArgMet   296
 841  TACGCTTCTTTTGCTTTGTGGGCAGTGACCCATCGAGGGGAGTTGTTTGACCTACGAATG   900

 297  SerSerValProSerValPheSerLysAlaSerThrValTyrAsnProPheIleTyrIle   316
 901  TCCTCTGTCCCTTCTGTATTTTCAAAGGCCTCAACTGTGTACAATCCATTTATCTATATA   960

 317  PheMetAsnArgGlnPheArgSerCysMetMetLysMetIlePheCysGlyLysAsnPro   336
 961  TTTATGAACAGACAGTTCCGCTCTTGCATGATGAAGATGATTTTCTGTGGCAAGAATCCT   1020

 337  LeuGlyAspAspGluGluThrSerValSerGlySerThrGlnValSerSerValSerSer   356
1021  TTGGGAGATGATGAAGAAACGTCTGTCTCTGGGTCTACTCAGGTATCATCAGTATCCAGC   1080

 357  SerGlnIleAlaProSerEnd                                          363
1081  AGCCAGATTGCCCCATCATAACACCGGACATACCAAGGTTTTGTGTTCTCGGAAA        1135

Darden, Mol Vis 2003; 9:191-199 <http://www.molvis.org/molvis/v9/a28/>
©2003 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535