Table 2 of
Escribano, Mol Vis 2002;
8:315-332.Table 2 of
Escribano, Mol Vis 2002;
8:315-332.
Table 2. Ciliary Body Subtracted (CBS) clones of unknown function
List of 105 subtracted ESTs isolated from a human ciliary body library [1]with unknown functions. Each ESTs is assigned to an Unigene cluster defined by the dbEST division of GenBank. Overlapping with ESTs isolated from other tissues or cells cDNA libraries is also indicated. The clone marked with an asterisk was previously analyzed [1].
GenBank
GenBank accession
CBS accession number of
clone number of homologous Unigene Unigene cDNA
number CBS clones mRNA or clone clones Chromosome cluster sources
------ ---------- ---------------------------------- ---------- ---------- --------- --------------------------
355 R45916 KIAA0731 protein - 5q33.2 Hs.365825 Eye; moderately
differentiated
adenocarcinoma;
pool
483 R88372 KIAA0697 protein XM_036687 4q13.3 Hs.12329 See note A
313 R45884 KIAA0258 gene product XM_005394 9p13.3 Hs.47313 See note A
44 R30650 KIAA1199 protein XM_051860 15q25.2 Hs.50081 See note A
455 R47223 KIAA0193 gene product NM_014766 7p14.3 Hs.75137 See note A
565 R95437 KIAA0172 protein XM_036297 9p24.3 Hs.311051 CNS;
hepatocellular carcinoma;
kidney; optic nerve;
pancreas; pool; prostate;
purified pancreatic islet;
uterus; whole embryo
47 R30651 KIAA0623 gene product XM_008514 17p11.2 Hs.151406 See note A
335 R45905 KIAA0828 protein AB020635 7q33.2 Hs.4984 See note A
248 R36817 KIAA1530 protein AL110229 - Hs.191268 See note A
478 R88370 KIAA1797 protein AB058700 9p22.1 Hs.274251 See note B
236 R36809 Hypothetical protein DKFZp762M136 XM_035635 19p13.3 Hs.351747 See note A
260 R36823 Chromosome 1 open reading frame 8 XM_038905 1p32.3 Hs.11441 See note B
661 R95486 Hypothetical protein MGC1223 XM_037121 6p25.1-p23 Hs.273077 See note A
484 R88373 Hypothetical protein dJ462023.2 AL031431 1p36.11 -
583 R95444 c3orf1 hypothetical protein, M5-14 XM_031160 3q13.33 Hs.79530 See note B
347 R45912 Hypothetical protein PRO1855 AF119857 17q21.33 -
558 R95433 Homo sapiens hypothetical protein NM_033309 16q22.1 -
MGC4655
62 R30658 Hypothetical protein MGC8721 XM_016499 8p12 Hs.279921 See note A
240 R36811 Homo sapiens hypothetical gene XM_031503 3q27.2 Hs.144609 See note A
supported by BC008043 (LOC90407)
2 R30633 Brain my047 protein AF063605 - -
350, R45913, bK407F11.C22.2.mRNA AL022329 22q12.1 Hs.4283 See note A
672 R95493
133 R30675 Homo sapiens hypothetical gene XM_053856 - -
supported by BC010463 (LOC113172)
475 R88368 Human anonymous mRNA sequence with U15426 16p13.2 -
CCA repeat region
344 R45910 cDNA DKFZp434K1210 AL137588 8p21.1 -
61 R30657 Homo sapiens cDNA FLJ33115 fis, AK057677 15q21 Hs.29894 See note A
clone TRACH2001314
372 R47186 cDNA FLJ14070 fis, AK024132 15q23 Hs.306666 Eye; prostate;
clone HEMBB1001619 whole embryo,
mainly body
336 R45906 Homo sapiens hypothetical protein XM_039852 17p11.2 Hs.130740 See note A
FLJ20308
340 R45907 Homo sapiens cDNA FLJ22524 fis, - - Hs.17625 See note A
clone HRC12688
637 R95471 Homo sapiens cDNA FLJ13090 fis, AK023152 7q11.21 Hs.287955 See note A
clone NT2RP3002142
605 R95454 Homo sapiens cDNA: FLJ20940 fis, AK024593 17q21.1 -
clone ADSE01608
90 R30666 Homo sapiens cDNA: FLJ22060 fis, XM_027793 17q23.2 Hs.29403 See note B
clone HEP10094
466 R88361 Homo sapiens mRNA for FLJ00086 XM_054174 16p13.3 Hs.343828 See note A
protein
501 R88381 Homo sapiens hypothetical protein XM_018376 - -
316 R45887 Hypoyhetical protein FLJ10337. XM_026998 9q34.13 Hs.173484 See note A
216 R36803 Hypothetical protein FLJ10875 - 1q23.1 Hs.20594 See note A
83 R30665 Hypothetical protein FLJ21801 XM_015768 8p21.3 Hs.299148 See note A
76 R30662 CGI-15 protein NM_015945 20q13.11 -
618 R95462 Homo sapiens cDNA: FLJ23367 fis, AK027020 4q13.3 Hs.59838 See note A
clone HEP15725
540 R88398 Homo sapiens cDNA FLJ30634 fis, AK055196 1q32.2 Hs.350065 See note A
clone CTONG2002453
476 R88369 PDZ domain containing-protein NM_002614 1q21.1 Hs.15456 See note B
(PDZK1)
564* R95436 Testis enhanced gene transcript NM_003217 12q13.12 Hs.74637 See note A
362 R45920 LR8 protein XM_032223 7q36.1 Hs.190161 See note A
258 R36822 Hypothetical protein IMAGE3455200 NM_024006 16p12.3 Hs.324844 See note A
236 R36809 Homo sapiens, Similar to BC004988 - -
feminization 1 a homolog
(C. elegans)
343 R45909 Homo sapiens 3 BAC RP11-432D10 AC068302 3q29 -
314 R45885 Homo sapiens similar to XM_059107 1p13.3 -
Hypothetical protein KIAA1218
(LOC127002)
468 R88363 Homo sapiens BAC clone RP11-499D5 - - -
from 16
11, R30636, Homo sapiens chromosome 21 segment AL163285 21q22.2 -
53 R30654 HS21C085
600 R95451 Human HepG2 3' region cDNA, D16914 - -
clone hmd3c12
272 R36829 Human Chromosome 7 AC092788 - -
clone RP11-348A15 complete sequence
633 R95468 Homo sapiens DNA sequence from AL021026 1q24.2 -
631 R95467 Human DNA sequence from clone AL589644 6p24.3 -
RP11-489K8 on chromosome 6
658 R95484 Homo sapiens CpG island DNA genomic Z59368 16p12.1 -
Mse1 fragment, clone 151g10 (Z59368)
179 R36788 Homo sapiens chromosome 5 AC016591 5q12.1 -
clone CTD-2003D5
28 R30646 Homo sapiens clone RP11-306G20 AC073320 7q32.2 -
29 R30647 BAC sequence from the SPG4 AL133243 2p22.3 -
candidate region at 2p21-2p22 BAC
559D11 of RPCI-11 library from
chromosome 2 of Homo sapiens
411 R47203 Homo sapiens genomic DNA, AP001528 11q14.2 -
chromosome 11q, clone:RP11-736K20
467 R88362 LOC129401 Mitotic phosphoprotein 44 AC064871 2q32.1 Hs.180591 See note A
264 R36825 Homo sapiens chromosome 5 AC008905 5q15 Hs.231971 Brain; CNS; eye;
clone CTD-2259I14 germ cell;
hippocampus;
hypothalamus,lung;
nervous tumor
535 R88396 Homo sapiens clone RP11-548H3 AC012510 2q35 Hs.293687 See note B
403 R47200 Homo sapiens chromosome 17, AC005277 17p12 -
clone hRPK.597_M_12
504 R88383 Human DNA sequence from AL049713 11p13 Hs.26433 See note B
clone RP1-247C2 on chromosome 11p13
652 R95480 Human DNA sequence from AL356318 9q13 -
clone RP11-161E22 on chromosome 9
580 R95442 Homo sapiens chromosome 5 AC008641 5q33.1 -
clone CTB-17P3
562 R95435 Homo sapiens chromosome 17, AC015651 17q23.2 -
clone RP11-55A13
453 R47222 Clone RP11-162D16 on chromosome 9 AL359644 9q33.3 Hs.253903 Carcinoma in situ
from retromolar
trigone; ear; eye
503 R88382 Human DNA sequence from clone AL121755 20p13 -
RP4-680N4 on chromosome 20
509 R88384 Homo sapiens 12q24.1 AC002395 12q24.11 Hs.202234 See note A
PAC RPCI1-315L5
250 R36819 Homo sapiens HDCMB12P AF067802 1p35.1 Hs.111449 See note A
323 R45893 Homo sapiens 3q27 BAC AC007917 3q27.2 -
RPCI11-379C23
330 R45900 Human DNA sequence from clone AL160397 13q14.2 -
RP11-83N23 on chromosome 13
341 R45908 Human DNA sequence from clone AL031120 6p25 -
459L4 on chromosome 6p22.3-24.1
297 R45882 Homo sapiens chromosome 9, AC006312 9q34.13 -
clone hRPK.401_G_18
278 R36831 Homo sapiens chromosome 16 AC020663 16p13.3 -
clone RPCI-11_127I20
292 R36836 Homo sapiens chromosome 17, AC006251 17p12 -
clone hRPK.692_E_18
608 R95457 Homo sapiens genomic DNA, AP000787 11q21 -
chromosome 11q clone:RP11-712B9
612 R95460 Homo sapiens BAC clone RP11-61L9 AC069282 7p12.3 -
54 R30655 Human DNA sequence from clone AL357075 Xq27.1 -
RP11-486M3 on chromosome 6
(AL357075)
368 R45922 Human DNA sequence from clone AL359633 6p12.3 -
RP11-795J1 on chromosome 6,
complete sequence
352 R45914 Human chromosome 14 DNA sequence AL591770 - -
BAC R-1140I5 of library RPCI-11
365 R45921 Human DNA sequence from clone AL121928 10q24.32 Hs.10915 See note A
RP11-18I14 on chromosome 10
532 R88393 Human DNA sequence from clone AL589763 1q43 -
RP11-290P14 on chromosome 1
324 R45894 Homo sapiens BAC clone RP11-298E6 AC019184 2p21 -
656 R95482 Human DNA sequence from clone AL137142 13q13.1 -
RP11-173P16 on chromosome
13q12.2-13.3
512 R88385 Homo sapiens chromosome 2p13 AC006544 2p12 -
clone bac91a19
551 R95427 Unknown - 17q24.2 Hs.30514 See note B
491 R88376 Unknown - 3q13.31 Hs.297912 dbEST Library
Tissue Type
restricted to eye
326 R45896 Unknown - 8q24.13 -
243 R36813 Unknown - 16q12.1 -
450 R47220 Unknown - 10q26.11 -
621 R95464 Unknown - 8q21.11 -
654 R95481 Unknown - 1p31.1 -
230 R36808 Unknown - 4p15.32 -
267 R36827 Unknown - 18q21.1 -
517 R88388 Unknown - 18p11.21 -
586 R95445 Unknown - 3q25.32 -
39 R30648 Unknown - 5q31.3 -
26 R30644 Unknown - 5q21.3 -
332 R45902 Unknown - 6p21.31 -
443 R47217 Unknown - 1p36.22 -
592 R95448 Unknown - - -
441 R47215 Unknown - - -
445 R47218 Unknown - - -
393 R47198 Unknown - - -
611 R95459 Unknown - - -
Note A: Identified in more than 10 cDNA libraries from different tissues
Note B: Identified in more than 10 cDNA libraries from different tissues including distinct eye tissues
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