Table 2 of
Sharma, Mol Vis 2002;
8:251-258.Table 2 of
Sharma, Mol Vis 2002;
8:251-258.
Table 2. Subtracted bovine cDNAs homologous to known mammalian genes
BLAST analysis was performed for each cDNA query sequence against the non-redundant nucleotide, protein, human EST and human genomic sequence databases. The Northern blot and BLAST analyses results are tabulated.
Expression
Clone name in this study Homology to known gene Species Reference
------------ ------------------ ------------------------------------ ------------- ---------
Homology to bovine genes:
S779 Retina Guanine nucleotide binding protein, Bovine [18]
gamma subunit in cones
S810, S1932 RPE SFRP5 Bovine [20]
S774 RPE RGR Bovine [21]
S1934, S2066 Retina, RPE RGR Bovine [21]
S2084 Retina, RPE Retinal cyclic GMP phosphodiesterase Bovine [19]
gamma-subunit
Homology to retinal disease genes:
S709 Retina, RPE PHR1 Human, mouse [24]
S1926 Retina, RPE NRL Human [6]
S2077 Retina, RPE HRG4, RRG4 Human, rat [7]
Homology to other genes
S727 RPE Stra6 Mouse [12]
S743 Retina, RPE WDR6 Human [41]
S751 Retina, brain TTYH1 Human [30]
S766 Retina, brain 40S ribosomal protein S13 Human
S905 All tissues tested Glyoxalase 1 Human [26]
S1631 All tissues tested SH3PX1 Human
S1929 Retina, RPE ACP33 Human [28]
S1944 Retina, RPE, Cytochrome b5 reductase 1 Human, bovine [42,43]
kidney/muscle
S1947 RPE Melastatin Mouse, human [44]
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