Table 2 of
Wistow, Mol Vis 2002;
8:171-184.Table 2 of
Wistow, Mol Vis 2002;
8:171-184.
Table 2. Cytoskeleton related transcripts from the combined lens libraries
Entries in black are from the un-normalized by collection, those in red are from the normalized fs collection. Representative GenBank entries are shown, along with the appropriate Unigene, chromosomal location and the number of ESTs identified using GRIST.
Description GenBank UniGene Chromosome # ------------------------------------------------- --------- ------- --------------- -- filensin (BFSP1) AF191045 129702 20p11.23-p12.1 14 phakinin (BFSP2) NM_003571 158321 3q21-q25 9 vimentin BC000163 2064 10p13 7 α-tubulin mRNA AK026516 272897 2q 4 destrin (actin depolymerizing factor) (ADF) XM_009655 82306 20 3 actin, β BC001301 288061 7p15-p12 2 actin, γ1 BC000292 14376 17q25 2 adducin 1 (α) L07261 183706 4p16.3 1 ankyrin 2, neuronal X56958 117970 4 1 annexin A7 BC002632 78637 10q21 1 caldesmon AJ223812 325474 7q33 1 gelsolin NM_000177 290070 9q33 1 microtubule-associated protein 4 (MAP4) XM_002993 239298 3p21 1 microtubule-associated protein, RP/EB family, NM_012325 234279 20q11.1-11.23 1 member 1 myosin regulatory light chain, complete cds D50372 180224 6p21.3 1 myosin, light polypeptide 6 XM_012180 77385 12 1 plakophilin 4 XM_002743 152151 2q23-q31 2 profilin 1 J03191 75721 17p13.3 1 Rac1 XM_004633 173737 7 1 spectrin β (SPTBN1) M96803 107164 2p21 1 supervillin AF109135 154567 10p11.2 1 tubulin-specific chaperone A XM_003955 24930 5 1 unconventional myosin (MYO15) AF051976 127561 17p11.2 1 armadillo repeat gene deletes in velocardiofacial NM_001670 171900 22q11.21 6 syndrome (ARVCF) myosin VB AK021780 172506 18 3 actin related protein 2/3 complex, subunit 3 (21 AF006086 6895 12q24 2 kD) actinin, α 4 D89980 182485 19q13 2 cofilin 1 (non-muscle) (CFL1) NM_005507 180370 11q13 2 cytoskeleton-associated protein 1 (CKAP1) XM_009339 31053 19q13.11-q13.12 2 flightless I (Drosophila) homolog NM_002018 83849 17p11.2 2 lamin A/C M13452 77886 1q21.2-q21.3 2 macrophin (microfilament and actin filament AL157452 108258 11 2 cross-linker) syntrophin, β2 (dystrophin-associated protein) XM_012485 172278 16q22-q23 2 microtubule-associated protein 4 (MAP4) XM_002993 239298 3p21 2 actin binding LIM protein 1 BC002448 158203 10q25 1 actin, β NM_001101 288061 7p15-p12 1 adducin 1 (α) NM_014190 183706 4p16.3 1 capping protein (actin filament) muscle Z-line, β NM_004930 76368 1p36.1 1 Cdc42 effector protein 2 AF001436 12289 11q13 1 Cdc42 effector protein 3 AF10487 260024 2 1 Cdc42-interacting protein 4 (CIP4) AJ000414 73999 19 1 cytoskeletal tropomyosin TM30(nm) X04588 85844 1q21-q22 1 dynactin 2 (p50) BC000718 84153 12 1 dynactin 3 (p22) BC000319 15961 9 1 dynein, cytoplasmic, light polypeptide NM_003746 5120 14q24 1 dynein, cytoplasmic, light intermediate AF035812 194625 16 1 polypeptide 2 filamin A, α (actin-binding protein-280) NM_001456 195464 Xq28 1 hexabrachion (tenascin C, cytotactin) (HXB) NM_002160 98998 9 1 microtubule-associated protein, RP/EB family, AB025186 172740 2p23.3-p23.1 1 member 3 myosin, light polypeptide 5, regulatory L03785 170482 4p16.3 1 ras homolog gene family, member A (rho A) L25080 77273 3p21.3 1 ras homolog gene family, member G (rho G) XM_006153 75082 11p15.5-p15.4 1 SWI/SNF related, matrix associated, actin X72889 198296 9p24-p23 1 dependent regulator of chromatin, subfamily a, member 2 88% protein similarity to: SWI/SNF related a 4 1 tubulin-specific chaperone D AL133562 12570 17 1 |