Figure 2 of Zhou, Mol Vis 2001; 7:79-88.


Figure 2. Mouse and human promoter sequence

DNA sequence of about 400 bp upstream of the transcription start site (+1) of both mouse and human Lim2. The noncoding exon 1 is marked in brown. Sequences having high homology between mouse and human are marked in red, dark purple, green, purple, and blue.

MOUSE            -380                -360                -340
GATCCTACC-GTACAAAGAACCCCTTGGCCTGACATGTCTAGATACCTATATCCACCCGT
 | |  ||| ||     || |   |   ||   |    | |    ||     ||||   |
-A-C--ACCTGT-----GA-C---T---CC---C----C-A----CC-----CCAC---T
HUMAN-400                                            -380
                 -320                -300                 -280
GCCATTGCTGCTTCCTGTCCCTTGAGCTGGGAAGCCCAGGTTGAACAATAAAACG-GTGT
||| | ||| ||||  ||     ||      |||||| |||||||||||||| || |||
GCC-T-GCT-CTTCAGGTA----GA------AAGCCCTGGTTGAACAATAAA-CGCGTGA
                              -360                -340
                                 -260
CTATC--T-A--CT--C-T-TAT-CTCTT-----TGTGTG-G-GT-T-T-TGC-T-T-T-
|| ||  | |  ||  | | | | | |       |||||| | || | | ||| | | |
CTCTCCCTGAATCTTGCGTGTGTGCGCGCGCCCGTGTGTGTGTGTGTGTGTGCGTGTGTG
           -320                -300                -280
    -240                     -220
C-TG-T-A-AGAG-TCAGGATAC--CCAGGGTGG----G-G-A---CTGG-GAATAAAG-
| || | | | || || ||| |   ||||||| |    | | |   |||| ||  || |
CGTGCTTACACAGCTC-GGACAAAGCCAGGGTTGCTTTGAGCAAGGCTGGCGAC-AAGGT
           -260                 -240                -220
-200                  -180                       -160
ACTGGGAAAT--GGGGAGGGTCACAGA---CAA-GAG-GT-TGATGGG-GCCCCTTTG-T
| ||||   |  |||||||||||||||   ||  ||| |  ||  ||| ||||| | | |
ATTGGGT--TCCGGGGAGGGTCACAGAGGTCAGTGAGTGGGTGGGGGGAGCCCCCTGGAT
               -200                -180                -160

          -140                 -120                  -100
CCCCTGCTTCAGCAAATTCCATTGG-GGCCTCTGCT-G-CCACTGTGTTTCTGCCTGCTG
 || ||||||||| ||||||||| | |||||||||  | || |||  |||||||||||||
GCC-TGCTTCAGCGAATTCCATTTGAGGCCTCTGCCAGACCGCTGCATTTCTGCCTGCTG
                -140                -120                -100
              -80                    -60                 -40
GAAGC-TGCTAGGCCA-TGC-AGTCATTGTGT-GGTGAGGCTTAAGGGATTTCGGGGGAA
||||| |||| ||  | ||  |  |||||||| || |||||||||||||||| |||| ||
GAAGCGTGCTGGGT-AGTGGGACCCATTGTGTAGG-GAGGCTTAAGGGATTT-GGGG-AA
                 -80                  -60
                   -20                 +1
CC-ACGAGG-CAGAGATGCCAGCAACCTGGCTCGGCTCAGTATCCA-CAGAGGGGCTGT-
|| | | || || ||| |||||  ||| ||||| ||||||| | || ||||||||| ||
CCTAAGGGGGCAAAGAGGCCAGTGACCAGGCTCAGCTCAGTCTGCAGCAGAGGGGCCGTC
-40                -20                 +1

GGCAGAAGGCAGGGCTCAGAACAGACTCTGCCACTCAG
||||||||| ||||||| |  ||| |||||| ||||||
GGCAGAAGG-AGGGCTCGGG-CAGGCTCTGCGACTCAG

Zhou, Mol Vis 2001; 7:79-88 <http://www.molvis.org/molvis/v7/a12/>
©2001 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535