Figure 5 of
Wistow, Mol Vis 2000;
6:79-84.
Figure 5. The 5'- region of the CRYGS gene
Human sequences are compared with those of the mouse crygs gene. Consensus transcription factor binding sites are indicated: MARE in pink, homeobox binding (Hb) sites in orange, SRY/Sox site in brown, AP-1 in purple, NF-E2 in blue, and TATA box in green (see text for details and references). Sequences are numbered relative to the transcription start site determined experimentally in mouse [7]. Exon 1 is shown in red.
-264 gagagactcttttgttcttaatttttacaac-tttgtctgggttttggtttc-ttgactc Human |||| | |||| ||| | ||||||| ||| |||| ||||||||||| | | |||| || -259 gagaaaatcttg-gttttgaattttttaaacgtttggctgggttttgggtgccttgattc Mouse MARE Hb -206 agcaaagtctgtaatgcagccctgcttggtaagcattaaaggcggtactgaagctttcct |||| || || ||||||| ||| || ||||||| ||| | || || ||| |||| -202 agcagagcctacaatgcagtagggctgggcgagcattacaggggccacaga-gctctcct Hb SRY AP-1 -146 ttattttataatcccagttgttttttctagaaaccatcaatagcgtctaaatgactgact |||||| ||||||||| |||||||| |||| |||||||||||| ||||||||||||||| -143 ttatttcataatcccaattgttttt-ctagcaaccatcaatagactctaaatgactgact NF-E2 TATA -86 caatttttggatcctattctcatgactaagcaaatgtttgactgaaaccagcccatataa ||| |||||||||| ||||||||||||||||| |||||||| | ||| || ||||| -84 caaattttggatccaattctcatgactaagcagatgtttgatttgaactgccctctataa Exon 1 -26 atgtcactgtgcctctaactctctgtagccattcctgaatttctttcagcactgggaaaa +34 ||||| || ||||| | | || ||| || | |||| || ||| |||| | || | || -24 atgtccctctgcctgt-agtc-ctggag-ctgccctggatctctctcagtagtgcgggaa +33 M S K T G T K Intron 1 ccagtctatgcaccaaaaATGTCTAAAACTGGAACCAAGgtaagtagtcatattgatttt +94 || || ||||| | |||||||||||||||| ||||||||| tcaacctttgcacatacaATGTCTAAAACTGGAGGCAAGgtaag---------------- +77 M S K T G G K tagcctacccgcttttcacctaatgatgcattcaacacacagaaaagcttttgcttcttt +154 || | | || ||| | | | | ||||| || | |||| ||||||| | -----taactgtttctcatccaggggcacgttcaa-----agcagagctgttgcttcact +127 gcctagaggtgagtatgatagtggttagagaactgggattgagagagaagattaagaaat +214 ||| ||| |||||| ||||| | | || | | |||||||||| | ||| gccctgagatgagtaaactagtgctcgagggacaatcctggggagagaagatgga-aaag +186 |