Table 1 of
Ayyagari, Mol Vis 1999;
5:13.Table 1 of
Ayyagari, Mol Vis 1999;
5:13.
Table 1. Primers
Primers used for the analysis of upstream red gene region, the red, green, and Tex 28 genes are listed according to their 5' to 3' positions on the chromosome. The "Location" column indicates the position of the primer 5' to 3' internal to the sequence of the accession number.
Gene Specificity Location GenBank Sequence 5'-3'
Accession
---------------- ----------- --------- ------------------------------
1 upstream red 8127-8146 Z47066 CTTGAGACCAGGAGGCAGAG
2 upstream red 8444-8425 Z47066 TCCTGCTAGGCCACTTGTTT
3 upstream red 10696-10715 Z47066 CGTCAGAGTGGGGACAAGTT
4 upstream red 10887-10868 Z47066 TTTCCTGTCATTCAGGGACC
5 upstream red 10887-10868 Z47066 GGTCCCTGAATGACAGGAAA
6 upstream red 11366-11385 Z47066 AAACCAGAACCTGTGCCATC
7 upstream red 11737-11718 Z47066 GCTTTGTCTCAGTGCCTTCC
8 upstream red 11718-11737 Z47066 GGAAGGCACTGAGACAAAGC
9 upstream red 12151-12132 Z47066 AGTGAGCCATGATCCTCCAG
10 upstream red 12132-12151 Z47066 CTGGAGGATCATGGCTCACT
11 upstream red 12658-12639 Z47066 GAGCTAAACTCCAAGCAGGC
12 upstream red 12610-12629 Z47066 TGGCTCAAAGCCAAACAAAT
13 upstream red 12989-12965 Z47066 TTCCTGACCTCAGCTGATCC
14 upstream red 1-20 S44029 CGAATTCGGACCAGCCTAGC
15 upstream red 461-443 S44029 TCACAGATCCTGACTAATG
16 upstream red 443-461 S44029 CATTAGTCAGGATCTGTGA
17 upstream red 971-951 S44029 CAGAGATCCAGGAGGGCATCA
18 upstream red 951-971 S44029 TGATGCCCTCCTGGATCTCTG
19 upstream red 1481-1461 S44029 CAGCTCAGCCTCATAATCTCA
20 upstream red 1461-1481 S44029 TGAGATTATGAGGCTGAGCTG
21 upstream red 1964-1945 S44029 GCCATTTGCCTTTGACACTT
22 upstream red 1945-1964 S44029 AAGTGTCAAAGGCAAATGGC
23 upstream red 2373-2353 S44029 GGTCCCACACTCTTGCAGAAG
24 upstream red 2353-2373 S44029 CTTCTGCAAGAGTGTGGGAC
25 upstream red 3012-2995 S44029 ATCCAAGAATGTGAGACC
26 upstream red 2995-3012 S44029 GGTCTCACATTCTTGGAT
27 upstream red 3397-3380 S44029 CAAGTGCCTTTCTTCCTCT
28 upstream red 3380-3397 S44029 AGAGGAAGAAAGGCACTTG
29 upstream red 4297-4279 S44029 GACTTCTTAATGGGTACAG
30 upstream red 4279-4297 S44029 CTGTACCCATTAAGAAGTC
31 upstream red 4830-4811 S44029 GGCTACCCATAGCAAGAATG
32 upstream red 4811-4830 S44029 CATTCTTGCTATGGGTAGCC
33 upstream red 5430-5410 S44029 CGCACATCCTGCTGTTGGCTT
34 upstream red 5410-5430 S44029 AAGCCAACAGCAGGATGTGCG
35 upstream red 6018-6000 S44029 CATGGCTATGGAAAGCCCT
36 upstream red 5869-5889 S44029 GCCCAATTAAGAGATCAGGTA
37 red/green 608-588 M13300 CTGGCTCACGGAGTTGCTGTT
38 red/green 252-236 M13301 GCCAGAGACCTGGTTCACAAT
39 red/green - [20] TTCCCCTTTGCTTTGGCTCAAAGC
40 red/green - [20] TCCTGGGTCACCCCACCCTGCA
41 red - [19] CATGATGATAGCGAGTGGGATG
42 red - [20] CATCCCACTCGCTATCATCATG
43 red/green - [20] TCCAACCCCCGACTCACTATC
44 red 121-141 M13304 GGTGGTGATGATCTTTGCGTA
45 red - [20] GCAGTACGCAAAGATCATCACC
46 red - [18] CATCAAAGGGTGGAAGGCGTAA
47 red/green - [19] ACGGTATTTTGATGTGGATCTGCT
48 red/green 266-246 M13305 GCAGTGAAAGCCTCTGTGACT
49 red/green 1479-1499 U45954 ACAACTCCCTATGCCTGGGTC
50 red/green - [17] TACTGGCCCCACGGCCTGAAG
51 red - [16] GACGCAGTACGCAAAGATC
52 red/green - [16] CTCTGTCGACTCATTTGAGGGCAGAGCAGC
53 red 83-100 M13302 GAGAGGTGGCTGGTGGTG
54 tex 28 20494-20513 Z68193 GAAAGGATCCTGGCAAAACA
55 tex 28 21188-21148 Z68193 CTTTCCCTGTTGCTGGAGAG
56 tex 28 6191-6210 Z46936 TTGGTTTGGGGGTATCAGAA
57 tex 28 6715-6696 Z46936 CGGAACTGAAGAGCACACAC
58 tex 28 22158-22177 Z46936 CCTTTCACCCTCCCATAGGT
59 tex 28 23011-23030 Z46936 AACGTGTCCAATTCTCCCAC
60 tex 28 26537-26556 Z46936 CCTGACCTCAAATGATTCCG
61 tex 28 27179-27160 Z46936 GGCCAGCACTTCATTGTCTT
62 tex 28 1392-1411 Z49258 CCCTTTAACCCAGCAGAACA
63 tex 28 1761-1742 Z49258 CGTGTGATTGTTGAGGAGGA
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