Table 1 of Bernstein, Mol Vis 1998; 4:24.


Table 1. Table title

Table 1. cDNA probes used in the study. The sequence of the oligonucleotide primer pairs used to generate the cDNA probes are shown, in the 5'-3' orientation. Predicted cDNA gene product size is shown, in base pair (bp). cDNA product identities were confirmed by dideoxynucleotide sequencing. The predicted sizes of known mRNA species corresponding to published genes are shown (expected). Accession numbers for the gene sequences used to design the oligonucleotide primer pairs are shown. PCR conditions used to generate the cDNA fragments are described in methods. Opsin: human rod opsin. a-PDE: the a-subunit of rod phosphodiesterase. ROM-1: human ROM-1. RDS: Human RDS/peripherin. CHM: Choroideremia gene product. OAT: Ornithine aminotransferase. TIMP-3: Human tissue of metalloproteinases-3. NDP: Norrie disease gene product.

Name          5' Primer Sequence               cDNA size   mRNA (exp)         Genbank Accession Number

Red Cone      GCT ACC TCC AAG TGT GGC TG       400 bp      1.5 kb             M13300, M13301, M13302,
              ATG CAG GCG ATA CCG AGG ACA                                       M13303, M13304, M13305

Opsin         GCC GGG GCC ACC TGG CTC GTC TC   156 bp      1.75 kb            K02281
              CGT CTT GGA CAC GGT AGC AGA G

[alpha]-PDE   AGA CGA GAG CCT GAA TAT CT       600 bp      3.0 kb             M26061
              CAG TGG TGT TAC TGG ATG CA
          
ROM-1         hfv100327; fovea EST (library)   800 bp      1.4 kb             M96759

RDS           CAA GTA TGC CAG ATG GAA GC       530 bp      3.0, 5.5 kb        M62958
              TGA GGC TGC TGT AGT AGC TCA

CHM           AGC CTC TGG CTG TAA ACT GTC T    548 bp      3.5 kb             X78121
              TGT GCT CAC GTG TGC AAT ACA

OAT           ACG TTG TTC TAT TAT GTA TCA      424 bp      2.2 kb             M14963
              ACT CAT GAA GCT ACC TCC TGA

TIMP-3        CAT GTG CAG TAC ATC CAT ACG      400 bp      5.5, 2.8, 2.4 kb   U02571
              GTC TGT GGC ATT GAT GAT GCT

NDP           TGC GAG GGG CAC TGC AGC CAG      270 bp      1.86 kb            X65882
              TGG CTG GTC GAA CTG CCT CTA

Bernstein, Mol Vis 1998; 4:24 <http://www.molvis.org/molvis/v4/a24/>
©1998 Molecular Vision <http://www.molvis.org/molvis/>
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