Figure 3 of
Xu, Mol Vis 4:10, 1998.
Figure 3. Phylogenetic analysis of salamander visual pigments
A DNA distance phylogenetic tree of visual pigments was constructed as described in Methods. The pseudonym names are presented as following: rhod, rhodopsin; red, red cone pigment; grn, green cone pigment; blue, blue cone pigment; Salmon Anct, ancient salmon opsin; prhop, pineal opsin; Viol, violet cone pigment. The GenBank accession numbers are: bovine blue , U92557; bovine red , L09725; bovine rhod , K00502, K00503, K00504, K00505, K00506; cavefish blue , S66818, S66819, S66828, S66829, S66838; cavefish grn4 , U12024; cavefish grn5 , U12025; cavefish red , M90075; chick blue , M92037; chick grn1 , M92038; chick prhod , U87449; chick red1 , M62903; chick red2 , X57490; chick rhod , D00702; chick viol , M92039; domcat red1 , AF031532; goldfish blue , L11864; goldfish grn1 , L11865; goldfish grn2 , L11866; goldfish red1 , L11867; goldfish rhod , L11863; human blue , M13295, M13296, M13297, M13298, M13299; human grn , M13306; human red1 , M13300, M13301, M13302, M13303, M13304, M13305; human rhod , K02281; lamprey rhod , U67123, U67124, U67125, U67126, U67127; mouse blue , U49720; mouse rhod , M55171; salamander blue, AF038946; salamander red, AF038947; salamander rhod , U36657; Salmon Anct, AF001499 .