Figure 1 of Xu, Mol Vis 4:10, 1998.


Figure 1. Nucleotide and deduced amino acid sequences of the salamander red and blue cone pigments

The nucleotide sequences is shown on the lower lines with the deduced amino acid sequence on the upper lines. The amino acid sequences are numbered with the first Met as +1. The termination codons are indicated by an asterisk (*). (A) Salamander red cone pigment (Genbank accession number AF038947); (B) Salamander blue cone pigment (Genbank accession number AF038946)

Figure 1A.

   1  GAAGTGAGGGAGGGAGAGCTGGAGACAAGGCGGGAAAGGATCCAGCGAGGAAGGAGAGCCCGGGAAAGGAGAGGT     75
  76  GAAGGAAAGGAAAGGACAAGCAAGTGAGAGTGAAGAGTCCTAGTTCCAAGCAAGAGAAGGGGAGGCCCCAGCAGC    150

   1    M  A  H  S  W  N  S  G  A  Y  A  A  R  R  R  Y  D  D  E  D  T  T  R  S  S     25
 151  CATGGCACATTCCTGGAACTCCGGCGCCTACGCGGCTCGGCGGAGGTACGACGATGAAGACACCACCAGGAGTAG    225

  26    I  F  T  Y  T  N  S  N  N  T  R  G  P  F  E  G  P  N  Y  H  I  A  P  R  W     50
 226  CATATTCACATACACCAACAGCAACAACACCAGGGGTCCCTTTGAAGGACCCAACTACCACATTGCTCCACGATG    300

  51    V  Y  N  L  T  T  L  W  M  I  F  V  V  F  A  S  V  F  T  N  G  L  V  L  V     75
 301  GGTCTACAACCTCACCACCCTTTGGATGATCTTTGTCGTATTTGCCTCCGTTTTTACCAATGGGCTGGTCCTCGT    375

  76    A  T  M  K  F  K  K  L  R  H  P  L  N  W  I  L  V  N  L  A  I  A  D  L  G    100
 376  GGCAACCATGAAGTTCAAGAAGCTGCGGCACCCTTTGAACTGGATCCTGGTAAACCTGGCAATTGCCGATCTTGG    450

 101    E  T  V  I  A  S  T  I  S  V  I  N  Q  M  F  G  Y  F  I  L  G  H  P  L  C    125
 451  GGAGACGGTCATCGCCAGCACCATTAGTGTCATCAATCAAATGTTTGGCTACTTCATCCTGGGGCACCCCCTGTG    525

 126    V  I  E  G  Y  T  V  S  V  C  G  I  S  A  L  W  S  L  T  I  I  A  W  E  R    150
 526  TGTTATCGAGGGCTACACAGTCTCTGTTTGTGGTATCTCAGCCCTCTGGTCCTTAACAATCATTGCCTGGGAAAG    600

 151    W  F  V  V  C  K  P  F  G  N  I  K  F  D  G  K  L  A  A  A  G  I  I  F  S    175
 601  GTGGTTTGTTGTCTGCAAACCTTTTGGCAACATTAAGTTCGATGGCAAACTGGCAGCTGCTGGGATCATCTTCTC    675

 176    W  V  W  S  A  G  W  C  A  P  P  I  F  G  W  S  R  Y  W  P  H  G  L  K  T    200
 676  TTGGGTGTGGTCGGCTGGTTGGTGTGCCCCACCCATCTTCGGCTGGAGCAGGTACTGGCCTCATGGCTTGAAGAC    750

 201    S  C  G  P  D  V  F  S  G  S  S  D  P  G  V  Q  S  Y  M  M  V  L  M  I  T    225
 751  CTCATGTGGTCCAGATGTGTTCAGCGGCAGCTCGGACCCTGGCGTTCAGTCATACATGATGGTCCTGATGATCAC    825

 226    C  C  I  L  P  L  S  I  I  I  I  C  Y  I  Q  V  W  W  A  I  R  Q  V  A  M    250
 826  CTGCTGTATCCTGCCATTGTCCATCATTATAATTTGCTACATTCAGGTCTGGTGGGCCATTCGACAGGTAGCCAT    900

 251    Q  Q  K  E  S  E  S  T  Q  K  A  E  R  E  V  S  R  M  V  V  V  M  I  I  A    275
 901  GCAGCAGAAGGAGTCTGAATCCACCCAGAAAGCCGAGCGAGAGGTATCCAGGATGGTGGTGGTCATGATCATTGC    975

 276    Y  I  F  C  W  G  P  Y  T  F  F  A  C  F  A  A  A  N  P  G  Y  A  F  H  P    300
 976  TTACATTTTCTGCTGGGGACCATACACCTTCTTTGCATGCTTCGCTGCTGCCAACCCAGGCTATGCCTTCCACCC   1050

 301    L  A  A  S  L  P  A  F  F  A  K  S  A  T  I  Y  N  P  I  I  Y  V  F  M  N    325
1051  ACTGGCTGCATCCCTTCCTGCCTTCTTCGCCAAGAGCGCCACCATCTACAACCCCATCATTTACGTTTTTATGAA   1125

 326    R  Q  F  R  N  C  I  Y  Q  L  F  G  K  K  V  D  D  G  S  E  M  S  S  A  S    350
1126  CCGCCAGTTTCGAAATTGCATCTATCAACTCTTTGGCAAGAAGGTGGATGACGGCTCTGAAATGTCTTCTGCCTC   1200

 351    R  T  E  V  S  S  V  S  N  S  S  V  S  P  A  *                               365
1201  CCGAACAGAGGTCTCCTCAGTTTCCAATTCCTCTGTGTCACCAGCATAGTTCCCATACGCAGAAAACCACCCAAA   1275
1276  TCAGCATGGTGTCTACTTATGCAGTTCGTCTCCATGCCTGAAAAGAAGCCCCACTTCTTTTTCCTCCATCTCTTT   1350
1351  TGAGCTCCATCTACCAGTCCACTGGGGCTCCATCTGCCTCTCTCGTTAGGTGTAAGCCTATCTAGTCTAACCCAT   1425
1426  TCATCCATCCATCTAGCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTCCATCGCCTTTTTTATTTCACCATCAAT   1500
1501  AGCCTCCTCTATCCACAACTCGATCTATCTGTCTATCTGTCTGTCTGTCATAATTTGGGTTTCTATAGACTCCTG   1575
1576  GGCATATCTATCTATCTATCTACCTATCTATCTATCTATCTA                                    1617

Figure 1B.

   1  GCACTCTGTCCCTCACGCTGCTGGTACCAAGGCTTACCCTTAGTCATCTCTTATCTTTCTGTACAAGGATAAAAA     75
  76  CAGATCTATTGTTACGTTCCCATTTCGATATACTTTTGGGCCTTGTGGCCGTTTGAATTTCCCTGCTTTGGAGTC    150

   1                         M  Y  K  G  K  Q  E  M  M  A  E  L  S  D  D  F  Y  I     18
 151  AGACCGGAGCGCCACCTTCACCATGTACAAAGGCAAACAAGAAATGATGGCGGAACTGTCGGATGACTTCTACAT    225

  19    P  V  P  M  E  T  T  N  I  S  A  L  S  P  F  L  V  P  Q  T  H  L  G  S  P     43
 226  CCCCGTGCCCATGGAAACGACCAACATCTCAGCCCTGAGCCCATTCCTGGTACCCCAGACCCACCTGGGGAGCCC    300

  44    A  V  F  M  S  L  A  A  F  M  F  L  K  V  V  F  G  F  P  I  N  L  L  T  V     68
 301  AGCGGTCTTCATGAGCTTGGCGGCCTTCATGTTCCTGAAGGTGGTCTTCGGCTTCCCGATCAACCTCCTCACCGT    375

  69    I  C  T  I  K  Y  K  K  L  R  S  H  L  N  Y  I  L  V  N  L  A  I  A  N  L     93
 376  CATCTGCACTATTAAGTACAAGAAATTACGCTCCCACCTCAACTACATTCTGGTCAACCTGGCCATAGCCAACCT    450

  94    L  V  V  S  V  G  S  T  V  A  F  Y  S  N  A  Q  M  Y  F  A  L  G  P  L  A    118
 451  GCTGGTCGTCTCTGTTGGCTCCACCGTGGCCTTCTACAGTAATGCACAGATGTACTTCGCTCTGGGGCCCTTGGC    525

 119    C  K  V  E  G  F  T  A  T  L  G  G  M  V  G  L  W  S  L  A  V  V  A  F  E    143
 526  CTGCAAGGTGGAGGGTTTCACTGCCACATTGGGAGGGATGGTAGGCCTATGGTCCCTGGCAGTAGTGGCCTTTGA    600

 144    R  F  L  V  I  C  K  P  L  G  S  F  T  F  R  E  S  H  A  I  M  G  C  A  F    168
 601  ACGATTCCTGGTCATCTGCAAACCGCTGGGCAGCTTTACCTTCCGAGAGAGTCATGCCATCATGGGCTGCGCCTT    675

 169    T  W  I  V  G  L  A  A  A  T  P  P  L  L  G  W  S  R  Y  I  P  E  G  L  H    193
 676  CACCTGGATCGTCGGACTTGCAGCGGCTACCCCTCCCTTGCTGGGCTGGAGCAGGTACATTCCTGAGGGCCTGCA    750

 194    C  S  C  G  P  D  W  Y  T  V  N  N  K  W  N  N  E  S  Y  V  L  F  L  F  C    218
 751  CTGCTCCTGTGGCCCAGATTGGTACACAGTCAACAACAAGTGGAACAACGAGTCCTATGTCCTCTTCCTCTTCTG    825

 219    F  C  F  G  V  P  L  T  T  I  I  F  S  Y  G  R  L  L  I  T  L  R  A  V  A    243
 826  CTTCTGCTTCGGTGTCCCTCTCACCACCATCATCTTCTCCTACGGCCGGCTCCTCATTACTCTCCGCGCTGTTGC    900

 244    K  Q  Q  E  Q  S  A  T  T  Q  K  A  E  R  E  V  T  R  M  V  I  F  M  V  A    268
 901  AAAGCAGCAGGAGCAGTCCGCCACCACCCAGAAGGCTGAGCGGGAGGTTACCAGGATGGTGATCTTCATGGTGGC    975

 269    G  F  L  V  C  W  L  P  Y  A  S  F  A  L  W  A  T  T  H  R  G  E  L  F  D    293
 976  AGGCTTCCTGGTGTGCTGGCTCCCCTACGCCTCCTTTGCCCTTTGGGCCACCACCCACCGTGGGGAGCTCTTCGA   1050

 294    L  R  M  A  S  I  P  S  V  F  S  K  A  S  T  V  Y  N  P  V  I  Y  I  F  M    318
1051  CCTCCGTATGGCCTCCATCCCCTCCGTCTTCTCCAAGGCGTCCACCGTCTACAACCCTGTCATATATATCTTCAT   1125

 319    N  R  Q  F  R  S  C  M  M  K  L  I  F  C  G  K  N  P  F  G  E  D  E  D  T    343
1126  GAACCGACAGTTCCGGTCCTGTATGATGAAGCTCATCTTCTGTGGCAAGAACCCCTTCGGGGAAGACGAAGACAC   1200

 344    S  V  S  A  Q  S  T  Q  V  S  S  V  S  S  S  Q  V  A  P  A  *                363
1201  TTCTGTCTCTGCCCAGTCCACCCAGGTCTCCTCTGTGTCAAGCAGTCAAGTGGCACCTGCATAGAATCTGCGGTC   1275
1276  ATGTGGTGGGCACGACATGGCGCAATGATATTGGAGGCTCCCTGCGATGTCAACCAAGCAAGTCCAAGCCTGTCC   1350
1351  TTCTCATCAGATCCTACCTCGTAGGGCACCCTCACACAAACCTGCGTCTTTCGATGGTGTTTAATAAGTATTTTC   1425
1426  TGAGGAACGAAAGACACTCCTCCACCACTGAAATGCTCCCCTCACCAAATTGGC                        1479

Xu, Mol Vis 1998; 4:10 <http://www.molvis.org/molvis/v4/p10>
©1998 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535