Table 1 of
Merolla, Mol Vis 2026; 32:102-118. Table 1 of
Merolla, Mol Vis 2026; 32:102-118.
Table 1. Egr1-targeting and control shRNA sequences.
| Name | Sigma-Aldrich clone ID | Insert sequence | Target region on Egr1 | Affinity to EGR1 |
|---|---|---|---|---|
| Sequence 1 | TRCN0000231218 | GGATGAGCTTACCCGCCATAT | CDS | 0 mismatches |
| Sequence 2 | TRCN0000374054 | GATAATTTGCATACTCTATTG | 3′UTR | 1 mismatch |
| Sequence 3 | TRCN0000081627 | GCTCTTAATACCACCTACCAA | CDS | 4 mismatches |
| Sequence 4 | TRCN0000231216 | CACTCCACTATCCACTATTAA | CDS | 5 mismatches |
| Sequence 5 | TRCN0000374131 | GACTTGATTTGCATGGTATTG | 3′UTR | 4 mismatches |
| Sequence 6 | TRCN0000231219 | GACCATCAAGTTGGCATAAAG | 3′UTR | 5 mismatches |
| Ctrl sequence | SHC002 | CAACAAGATGAAGAGCACCAA | NA | NA |