Table 2 of
Akhtar, Mol Vis 2025; 31:206-219.
Table 2. List of variants identified in current study in CNG channels associated retinal dystrophies.
| Sr. No. | Family ID | Accession number | Gene | Zygosity | Variant | Exon | Nucleotide change | Protein change | dbSNP ID | ClinVar ID/ Classification | gnomAD | Variant Interpretation (Codes Met) | Curated variant classification |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | RD001 | (NM_001298.3) | CNGA3 | Homo | CHR2:99013274C>A | 8 | c.1641C>A | p.(Phe547Leu) | rs104893617 | 9478/P/LP | 0.000159 | PM2, PP1, PP2, PP3, PP4 | Pathogenic |
| 2 | RD004 | (NM_001298.3) | CNGA3 | Homo | CHR2:99012433G>T | 8 | c.800G>T | p.(Gly267Val) | Novel | NA | NA | PM2, PP1, PP2, PP3, PP4 | Pathogenic |
| 3 | RD021 | (NM_019098.5) | CNGB3 | Homo | CHR8:87656004A>G | 10 | c.1153T>C | p.(Trp385Arg) | Novel | NA | NA | PM2, PP1, PP2, PP3, PP4 | Pathogenic |
| 4 | RD025 | (NM_001298.3) | CNGA3 | Homo | CHR2:99012588T>C | 8 | c.955T>C | p.(Cys319Arg) | rs753625117 | 191,120/P/LP | 1.77E-05 | PM2, PP1, PP2, PP3, PP4 | Pathogenic |
| 5 | RD028 | (NM_001298.3) | CNGA3 | Homo | CHR2:99013274C>A | 8 | c.1641C>A | p.(Phe547Leu) | rs104893617 | 9478/P/LP | 0.000159 | PM2, PP1, PP2, PP3, PP4 | Pathogenic |
| 6 | RD031 | (NM_001298.3) | CNGA3 | Homo | CHR2:99013443C>T | 8 | c.1810C>T | p.(Gln604*) | rs753692812 | 444,512/LP | 3.99E-06 | PM2, PVS1, PP1, PP4 | Pathogenic |
| 7 | RD053 | (NM_000087.5) | CNGA1 | Homo | CHR4:47938866T>A | 11 | c.1633A>T | p.(Ile545Phe) | rs752905054 | NA | 2.41E-05 | PM2, PP1, PP2, PP3, PP4 | Pathogenic |
| 8 | RP125 | (NM_001298.3) | CNGA3 | Homo | CHR2:99012460A>G | 8 | c.827A>G | p.(Asn276Ser) | rs199474697 | 156,335/LP/VUS | NA | PM2, PP1, PP2, PP3, PP4 | Pathogenic |