Table 9 of
Altankhuyag, Mol Vis 2024; 30:320-335.
Table 9. Pairwise linkage disequilibrium and statistical significance for the CFH and VEGF-A SNPs.
| SNP1 | SNP2 | Allele counts | D'-value | 95% CI | r-square | p-value |
|---|---|---|---|---|---|---|
| rs1061170 | rs1065489 | 768 | 0.884 | 0.804-0.964 | 0.142 | 7.63E-26 |
| rs1061170 | rs800292 | 768 | 0.699 | 0.600-0.798 | 0.177 | 4.37E-31 |
| rs1065489 | rs800292 | 768 | 0.256 | 0.177-0.334 | 0.055 | 1.15E-10 |
| rs833061 | rs1413711 | 768 | 0.889 | 0.838-0.939 | 0.637 | 9.30E-109 |
| rs833061 | rs2010963 | 768 | 1.00 | 0.999-1.00 | 0.209 | 9.89E-37 |
| rs833061 | rs144854329 | 768 | 0.931 | 0.891-0.971 | 0.774 | 4.72E-132 |
| rs833061 | rs2146323 | 768 | 0.781 | 0.715-0.847 | 0.516 | 8.59E-89 |
| rs833061 | rs1570360 | 768 | 0.803 | 0.728-0.878 | 0.404 | 3.40E-70 |
| rs1413711 | rs2010963 | 768 | 0.801 | 0.715-0.887 | 0.166 | 7.27E-30 |
| rs1413711 | rs144854329 | 768 | 0.767 | 0.701-0.832 | 0.530 | 2.16E-90 |
| rs1413711 | rs2146323 | 768 | 0.633 | 0.561-0.706 | 0.382 | 5.62E-66 |
| rs1413711 | rs1570360 | 768 | 0.741 | 0.655-0.827 | 0.277 | 1.39E-47 |
| rs2010963 | rs144854329 | 768 | 0.979 | 0.939-1.00 | 0.224 | 5.17E-39 |
| rs2010963 | rs2146323 | 768 | 0.736 | 0.638-0.835 | 0.134 | 2.38E-24 |
| rs2010963 | rs1570360 | 768 | 0.967 | 0.903-1.00 | 0.122 | 5.41E-22 |
| rs144854329 | rs2146323 | 768 | 0.705 | 0.636-0.775 | 0.471 | 5.26E-81 |
| rs144854329 | rs1570360 | 768 | 0.838 | 0.768-0.908 | 0.393 | 9.66E-68 |
| rs2146323 | rs1570360 | 768 | 0.744 | 0.66-0.829 | 0.293 | 2.39E-50 |