Table 1 of
Cai, Mol Vis 2020; 26:483-493. Table 1 of
Cai, Mol Vis 2020; 26:483-493.
Table 1. Selected primers for DMR validation using Zymo OneStep qMethyl Kit.
| Probe ID | Gene Symbol | Gene Description | Forward Primer | Reverse Primer | Amplicon Size, bp |
|---|---|---|---|---|---|
| cg13078798 | TGFBR3 | Transforming growth factor, β receptor III | TGA GGA TGC ATT TGG ATG AG | AAG GCC TGT AGG CTG CTG TA | 200 |
| cg16055869 | CXCL5 | Chemokine (C-X-C motif) ligand 5 | CTC TAC CGA GAG GGA CGT TG | AGG AGG AGC ATC TCC CAG AG | 171 |
| cg21951797 | TNXB | Tenascin XB | GGA ACA CAA ATG ACC CGT AGA | AGC CCA CGT TTT TCT AGT GA | 345 |
| cg07139946 | GGC TCA GTC AGA CCA GGA GA | AGG GCC AGT TTG ACT CCT TT | 255 | ||
| cg17982478 | PLEKHA7 | Pleckstrin homology domain contaning, family A member 7 | CCC GAA CGC TCA GTA AAC C | CCA GCT GAA AAC TTG GGA AA | 273 |
| cg03133735 | PITX2 | Paired-like homeodomain 2 | TAC TAT GCG TTG CCG ATT CC | AAA GAC CCC TGC TCC AAA AT | 268 |
| cg01733176 | GTG TGG AAG GAG CTG GAC AT | ATT GCT TGC TTT GCT TGG AC | 295 | ||
| cg26500914 cg24498636 | DAXX | Death-domain associated protein | GTA CCC CAT CCA CAC CTC AC | GGG CTG AGT GCT CTG ACT TT | 263 |
| cg05431670 | GTC ACA GAG TTT CCG CCT TC | GTA GAA GCA CCG GGT GAA AA | 268 | ||
| cg16277169 | TBX3 | T-Box 3 | GAA ACT GGA CGA AAG GTG GA | GGG CCA ACA GTT CTT CAA C | 300 |
| cg18161956 | TCA GCA GCG AAA AGG TGA G | CAG AGA GGC TAA GGG GCT TT | 300 | ||
| cg09413529 | TGC CCG TTG AAG AAC TGT TG | CAC CAT CTC GTC CAG CAC T | 227 | ||
| cg11246938 | AGT GCT GGA CGA GAT GGT G | GAG AGC AAA GAG GAG CAT GG | 201 | ||
| cg09053536 | GAA TTC AGT TTC GGG GAA CA | TTT GGC AAC TGA GGA GCA AT | 322 | ||
| cg13661397 | NET1 | Neuroepithelial cell transforming 1 | GAT GCG CTC AGG AGT TAA GG | CAG CGA TCA GCC AAT CAG T | 130 |