Figure 6 of Wang, Mol Vis 2019; 25:345-358.


Figure 6. An example of a true differentially expressed gene. A: Expression levels of Stab2 mRNA (y-axis) across the BXD strains (x-axis) from the Department of Defense (DoD) database (Probe_17243763). B: Probe verification at UCSC demonstrates that there is no single nucleotide polymorphism (SNP) in the probe coverage area. C: This gene is also identified as a differentially expressed gene in the RNA sequencing (RNA-seq) data. Viewing the RNA-seq signal in the Integrative Genomics Viewer (IGV) browser further confirms that this gene is highly expressed in D2 mice in all the exons, while there is no signal for the B6 mice.