Table 2 of Harman, Mol Vis 2018; 24:875-889.


Table 2. Top 25 highest scoring proteins from the phosphopeptide-enriched data set. SEQUEST-HT scoring was used to rank proteins identified.

Accession Description Score Sequest HT Sum PEP Score # PSMs MW [kDa] calc. pI
P14873 microtubule-associated protein 1B 12,723.65 958.59 8536 270.1 4.83
P17095-P2 High mobility group protein HMG-I/HMG-Y 7846.16 103.95 2633 11.6 10.32
P07901 Heat shock protein HSP 90-alpha 6057.90 172.91 1818 84.7 5.01
P15409 Rhodopsin 5794.45 62.49 5315 39.0 6.65
P51859 hepatoma-derived growth factor 4958.06 158.42 2047 26.3 4.83
Q99JF8 PC4 and SFRS1-interacting protein 4043.27 218.72 2325 59.7 9.13
P20357 microtubule-associated protein 2 4000.63 231.90 2248 199.0 4.91
P47955 60S acidic ribosomal protein P1 3970.19 52.05 938 11.5 4.32
Q8CJ40 Rootletin 3479.92 196.60 2171 226.8 5.55
P24622-P2 Isoform 2 of Alpha-crystallin A chain 3355.14 51.93 1617 19.8 6.20
P99027 60S acidic ribosomal protein P2 3329.04 44.32 790 11.6 4.54
Q62188 Dihydropyrimidinase-related protein 3 3159.62 91.63 1700 61.9 6.49
O08553 Dihydropyrimidinase-related protein 2 3074.13 61.41 1106 62.2 6.38
P54227 Stathmin 3042.13 98.24 1314 17.3 5.97
Q9JIX8 Apoptotic chromatin condensation inducer in the nucleus 2842.98 139.20 1645 150.6 5.91
Q52KI8–1 Serine/arginine repetitive matrix protein 1 2757.02 138.94 1241 106.8 11.87
P27546-P1 Microtubule-associated protein 4 2656.20 311.12 1885 117.4 4.98
Q5XG69 Soluble lamin-associated protein of 75 kDa 2483.44 217.05 1975 73.2 4.68
O55022 Membrane-associated progesterone receptor component 1 2414.01 57.20 1374 21.7 4.70
P10637-P1 Microtubule-associated protein tau 2390.67 151.41 1070 76.2 6.79
P61264 Syntaxin-1B 2372.25 63.03 741 33.2 5.38
P10637-P5 Isoform Tau-D of Microtubule-associated protein tau 2359.53 138.35 1027 38.9 9.50
Q8BTI8 serine/arginine repetitive matrix protein 2 2316.97 269.79 1692 294.7 12.03
O70318 band 4.1-like protein 2 2290.07 197.13 865 109.9 5.43
Q80X80 Phospholipid transfer protein C2CD2L 2131.65 166.44 1372 76.3 7.21