Table 3 of Davoudi, Mol Vis 2018; 24:59-74.

Table 3. Association results for sarcoidosis-associated uveitis.

Gene Chr SNP Ref/Alternate Allele Ref Allele Frequency Cases (n=45) Ref Allele Frequency Controls (n=32) OR 95% CI Pcorr
CFH Y402H 1 rs1061170 C/T 0.34 0.37 0.87 0.45–1.71 0.85
IL23R 1 rs11209026 A/G 0.07 0.04 1.52 0.36–6.34 0.48
IL23R 1 rs11465804 G/T 0.07 0.06 1.07 0.29–3.96 0.85
IL23R 1 rs7517847 G/T 0.38 0.29 1.51 0.48–4.78 0.47
TGF-β2 1 rs1891467 G/A 0.31 0.23 1.50 0.72–3.12 0.34
CCR 5 3 rs1799987 A/G 0.51 0.45 1.26 0.66–2.40 0.85
BTNL2 6 rs9268480 T/C 0.31 0.22 1.63 0.77–3.45 0.17
BTNL2 6 rs9268482 T/A 0.31 0.22 1.63 0.77–3.45 0.17
HLA- DQA1 6 rs17843604 T/C 0.49 0.48 1.02 0.54–1.93 1.00
HLA- DRA 6 rs7192 T/G 0.35 0.47 0.61 0.32–1.18 0.17
HLA- DRA 6 rs7194 G/A 0.35 0.47 0.61 0.32–1.18 0.17
HLA- DRB1 6 rs615672 C/G 0.40 0.48 0.71 0.37–1.35 0.34
HLA- DRB5 6 rs17203612 T/A 0.41 0.25 2.06 1.01–4.19 0.07
HSP-70/Hom 6 rs2075800 T/C 0.30 0.35 0.76 0.38–1.51 0.50
HSP-70/Hom 6 rs1043620 T/C 0.03 0.08 0.31 0.05–1.65 0.24
LTA 6 rs909253 G/A 0.50 0.36 1.78 0.92–3.44 0.15
NOTCH4 6 rs715299 G/T 0.38 0.31 1.37 0.69–2.71 0.40
RAB23 6 rs1040461 T/C 0.02 0.00* N/A N/A 0.01
TNF-α 6 rs1800629 A/G 0.16 0.17 0.94 0.39–2.23 1.00
TLR4 9 rs4986790 G/A 0.02 0.07 0.31 0.05–1.43 0.10
ANXA11 10 rs2789679 T/A 0.31 0.41 0.66 0.34–1.29 0.18
ANXA11 10 rs2573346 A/G 0.33 0.41 0.71 0.36–1.38 0.27
ANXA11 10 rs1049550 A/G 0.34 0.41 0.74 0.38–1.45 0.35
ANXA11 10 rs61860052 A/C 0.13 0.03 4.77 1.03–22.11 0.02
ANXA11 and PLAC9 10 rs1953600 T/C 0.32 0.41 0.71 0.36–1.38 0.26
C10ORF67/10p12.2 10 rs1398024 T/G 0.21 0.20 1.05 0.47–2.32 1.00
IL2RA 10 rs12722489 T/C 0.13 0.08 1.73 0.57–5.26 0.31
CDCC88B 11 rs671976 G/A 0.50 0.50 1.00 0.52–1.91 1.00
CDCC88B 11 rs479777 C/T 0.26 0.28 0.88 0.42–1.82 0.86
OS9 12 rs11172300 T/C 0.36 0.36 1.00 0.51–1.97 0.86
OS9 12 rs701007 A/C 0.40 0.42 0.91 0.48–1.75 0.86
OS9 12 rs799265 G/A 0.43 0.42 1.05 0.55–2.00 1.00
TGF-β3 14 rs3917200 G/A 0.17 0.09 2.04 0.74–5.60 0.31
TGF-β3 14 rs3917165 T/C 0.12 0.08 1.55 0.50–4.79 0.59
HERC2 15 rs916977 T/C 0.33 0.30 1.14 0.57–2.42 0.85

*Not present in any controls. Chr=chromosome, CI=confidence interval, SNP=single nucleotide polymorphism, OR=odds ratio, CI=confidence interval, Pcorr=P value corrected for multiple testing by permutation, Ref Allele=reference allele, N/A=not available

Davoudi, Mol Vis 2018; 24:59-74. http://www.molvis.org/molvis/v24/59

©2018 Molecular Vision http://www.molvis.org/molvis/

ISSN 1090-0535