Table 2 of
Bales, Mol Vis 2018; 24:153-164. Table 2 of
Bales, Mol Vis 2018; 24:153-164.
Table 2. Genes in visually related GO terms and KEGG pathway.
| Gene name | Description | GO: Visual perception | GO: Photoreceptor outer segment | KEGG: Phototrasnduction | log2 FC |
|---|---|---|---|---|---|
| Abca4 | ATP-binding cassette, sub-family A, member 4 | X | X | −1.27 | |
| Grk1 | G protein-coupled receptor kinase 1 | X | X | X | −1.60 |
| Irx5 | Iroquois related homeobox 5 | X | 1.25 | ||
| Ush2a | Usher syndrome 2A | X | −1.17 | ||
| Adgrv1 | adhesion G protein-coupled receptor V1 | X | −1.94 | ||
| Arr3 | arrestin 3, retinal | X | X | −2.22 | |
| BC027072 | cDNA sequence BC027072 | X | X | −1.82 | |
| Cabp4 | calcium binding protein 4 | X | −1.61 | ||
| Cln5 | ceroid-lipofuscinosis, neuronal 5 | X | −1.30 | ||
| Ccdc66 | coiled-coil domain containing 66 | X | −1.02 | ||
| Cngb3 | cyclic nucleotide gated channel beta 3 | X | X | −1.03 | |
| Cnnm4 | cyclin M4 | X | −1.38 | ||
| Dll4 | delta-like 4 | X | 2.1 | ||
| Gabrr2 | gamma-aminobutyric acid C receptor, subunit rho 2 | X | −1.48 | ||
| Gnat1 | guanine nucleotide binding protein, alpha transducing 1 | X | X | X | −2.31 |
| Gnat2 | guanine nucleotide binding protein, alpha transducing 2 | X | X | X | −1.13 |
| Gucy2e | guanylate cyclase 2e | X | X | −1.70 | |
| Gucy2f | guanylate cyclase 2f | X | X | −1.44 | |
| Guca1b | guanylate cyclase activator 1B | X | X | X | −2.66 |
| Guca1a | guanylate cyclase activator 1a | X | X | X | −2.49 |
| Nyx | nyctalopin | X | −1.91 | ||
| Opn1sw | opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) | X | X | −1.05 | |
| Pde6a | phosphodiesterase 6A, cGMP-specific, rod, alpha | X | X | −1.66 | |
| Pde6h | phosphodiesterase 6H, cGMP-specific, cone, gamma | X | −2.59 | ||
| Pcdh15 | protocadherin 15 | X | X | −1.61 | |
| Rcvrn | recoverin | X | X | −1.17 | |
| Rgs9bp | regulator of G-protein signaling 9 binding protein | X | X | −1.51 | |
| Rd3 | retinal degeneration 3 | X | −1.40 | ||
| Rpe65 | retinal pigment epithelium 65 | X | 1.19 | ||
| Rp1l1 | retinitis pigmentosa 1 homolog like 1 | X | X | −1.26 | |
| Rdh10 | retinol dehydrogenase 10 | X | 1.21 | ||
| Rho | rhodopsin | X | X | X | −3.13 |
| Sema5b | sema domain, seven thrombospondin repeats, transmembrane domain and short cytoplasmic domain, 5B | X | 1.35 | ||
| Slc24a1 | solute carrier family 24, member 1 | X | X | −1.44 | |
| Gngt1 | guanine nucleotide binding protein, gamma transducing activity polypeptide 1 | X | X | −1.04 | |
| Mak | male germ cell-associated kinase | X | −1.34 | ||
| Myrip | myosin VIIA and Rab interacting protein | X | −1.56 | ||