Table 1 of
Huang, Mol Vis 2017; 23:614-623. Table 1 of
Huang, Mol Vis 2017; 23:614-623.
Table 1. Target and non-target microorganisms used for testing candidate oligonucleotide probes.
| Microorganism | Species and strain no.a |
|---|---|
| Target | |
| Acanthamoeba (n=20) | Acanthamoeba castellanii ATCC 30,010, ATCC 50,370, ATCC 50,374 Acanthamoeba culbertsoni ATCC 30,171 Acanthamoeba griffini ATCC 30,731, ATCC 50,702 Acanthamoeba hatchetti ATCC 30,730, ATCC 50,672 Acanthamoeba jacobsi ATCC 30,732 Acanthamoeba lugdunensis ATCC 50,240 Acanthamoeba mauritaniensis ATCC 50,676 Acanthamoeba palestinensis ATCC 30,870, ATCC 50,708 Acanthamoeba polyphaga ATCC 30,461, ATCC 30,487, ATCC 30,873 Acanthamoeba pustulosa ATCC 50,252 Acanthamoeba quina ATCC 50,241 Acanthamoeba rhysodes ATCC 30,973, ATCC 50,368 |
| Microsporidia (n=3) | Encephalitozoon cuniculi ATCC 50,789 Encephalitozoon hellem ATCC 50,504 Encephalitozoon intestinalis ATCC 50,651 |
| Non-target | |
|---|---|
| Bacteria (n=20) | Escherichia coli BCRC 13,095, BCRC 15,481 Klebsiella pneumoniae BCRC 11,644, CCUG 15,938 Mycobacterium chelonae ATCC 35,752, CCUG 37,827 Mycobacterium fortuitum ATCC 6841, ATCC 19,542 Nocardia farcinica BCRC 13,364, BCRC 13,380 Pseudomonas aeruginosa ATCC 27,853, BCRC 10,944 Serratia marcescens BCRC 10,768, BCRC 10,948 Staphylococcus aureus BCRC 10,780, BCRC 14,957 Staphylococcus epidermidis BCRC 14,976, BCRC 14,988 Streptococcus pneumoniae BCRC 10,794, BCRC 14,733 |
| Fungi (n=20) | Alternaria alternata BCRC 32,888, CBS 109,455 Aspergillus flavus BCRC 30,006, BCRC 30,009 Aspergillus fumigatus BCRC 30,502, BCRC 32,120 Candida albicans BCRC 20,511, BCRC 20,512 Candida parapsilosis BCRC 20,515, BCRC 21,253 Curvularia pallescens CBS 156.35, CBS 102,694 Curvularia senegalensis CBS 149.71, CBS 102,171 Fusarium oxysporum ATCC 26,225, CBS 798.95 Fusarium solani BCRC 32,446, BCRC 32,448 Penicillium lilacinum BCRC 31,616, CBS 100,229 |