Table 4 of Mansergh, Mol Vis 2015; 21:61-87.


Table 4. Genes differentially regulated in all comparisons of RPC versus pn1, RPC versus pn5, pn1 versus pn5 (but not significantly changed between FACS positive and negative samples).

Differentially regulated genes    
ENSMUSG00000063277 Grina Rbpms
1200009O22Rik H3f3b [31] Rffl
1700020C11Rik [31] Hba-a1, Hba-a2 [31] Rnmt
1810009A15Rik Hist2h2aa1, Hist2h2aa2, Hist2h2ac, Hist2h3c1 Rpl19
2310028O11Rik Hmgn1 Sdha
2310044H10Rik Hsd17b4 Sfrs14 [31]
2410017P09Rik Hspe1 Snrnp40
Acadl Jam2 [31] Snrpn /// Snurf [37]
Ak3l1 /// LOC100047616 Lhx9 Sox6
Asf1a LOC100044115, Rin2 Sub1
Atp5k LOC100044139, Snrpn, Snurf Tspan31
Banf1 LOC100045551, Ppm1d Tspan7
BC016201 [31] LOC100046232, Nfil3 Tuba1a
Cadm3 LOC100046704, Nras Txn1
Calb1 LOC100047393, Nae1 Uba2
Chrna6 LOC677317, Me1 Ube2d2
Cox6b1 Mcm7 [30] Ube2e1
Cox7c, LOC100047065, LOC100048613 Mdfic Vsnl1 [31]
Cplx3 Med19  
D0H4S114 Ndrg1 [37] Diff regulated + Neighbours
Dab2ip Ndrg4 Otx2 [30,34]
Deb1 Ndufa6 [31] Stxbp1 [31]
Dohh Nlk [31]  
Eef1b2 Notch4  
Eef1g, LOC100047986 P4hb  
Extl3 Pcdhga1-12, Pcdhgb1-8, Pcdhgc3-5 [31]  
Fam108a Phactr1 [31]  
Fam125a Phb  
Fkbp3 Pip5k1a  
Gba2 Pkig [31]  
Gdpd5 Pnkd  
Glo1 [31] Polr2e  
Hist1h2bc, Hist1h2be, Hist1h2bl, Hist1h2bm, Hist1h2bp, LOC100046213 Prdx3  
Gm5256, Gm5529, Slc25a5 Prkar1b [31]  
Gm6293, Uqcr10 Prnp [31]  
Gm9800, Ptma Psrc1