Table 3 of
Mansergh, Mol Vis 2015; 21:61-87.
Table 3. Genes downregulated in rods, as determined by downregulation in FACSed Rho-eGFP positive cells and expression changes in at least 2/3 other comparisons (RPC versus pn1, RPC versus pn5, pn1 versus pn5).
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1110002B05Rik | Dbn1 | Itgb1 | Pip4k2a | Spred1 |
1190002N15Rik | Dkk3 [31] | Itm2c | Pkia [31] | Srgap3 |
2700094K13Rik | Dpysl4 | Kcnmb4 | Plagl1 [37] | Sri [32] |
41160 | Dpysl5 | Kctd17 | Ppap2b | St14 |
6330527O06Rik [31] | Ebf1 | Kdr | Ppic | St6galnac5 |
Abcd2 [39] | Epdr1 | Khdrbs3 | Ppp1r14b [31] | St8sia2 |
Adam12 | Epha3 | Klhl13 | Pros1 | Stmn2 |
Agap1 | Evl | Laptm4a | Ptgds | Stmn4 |
Aif1l | F2r | Ldb1 [32] | Ptn | Sulf2 |
Aldh2 | Fads1 | Lgr5 | Ptprk | Tcf7l1 |
Ank3 [32] | Fam19a5 | Limk1 | Ptprz1 | Tcf7l2 |
Ankrd43 | Fbxw7 | Litaf [31] | Qk | Tcfap2a |
Anxa5 | Fezf2 | Lrp1 | Rab31 | Tcfap2b |
Arhgdia | Fgf13 | Lrrn1 | Rai14 | Tcfap2c |
Arrb1 | Fgf15 | Magt1 | Rap2b | Tiam1 |
Ass1 | Fgf9 | Map4k4 [31] | Rftn2 | Timp2 [31] |
Astn1 | Fgfr1 | Mapk6 [31] | Rgl1 | Tmeff2 |
Atp2b2 | Fgfrl1 LOC100046239 | Marveld1 | Rgs2 | Tmem43 |
Auts2 [32] | Fjx1 | Mdk | Rnasel [31] | Tmtc4 |
B2m | Fkbp7 | Mfge8 | Rnd3 | Tnfrsf21 |
Basp1 LOC100045716 | Fkbp9 | Mllt11 | Rrh | Tor1aip2 |
Bcl11a | Foxn4 | Mmp2 | Rrm2 | Tpbg |
Bhlhe22 | Ftl1/2/Gm10116 | Mpp3 | Rsu1 | Traf4 |
Cadps [31] | Fuca1 | Msn | Rtn4 [31] | Tspan14 |
Capn2 | Fyn | Mt1 | Sash1 | Vim |
Cartpt | Gad2 | Mtap6 | Sat1 [31] | Ywhag [37] |
Cat | Gm3932 | Myadm | Scd2 [37] | Zbtb12 |
Cbx2 | Gng3 | Myb [30,37] | Sema4d | |
Ccng2 [31] | Gp1bb | Ncan | Sepp1 |
|
Cd151 [39] | Gpc1 [31] | Ndrg4 | Serpine2 |
|
Cd9 | Gpc3 | Neurod4 [30,33,37] | Serping1 | Cmtm7 |
Cdc42se1 | Gpr37 [31] | Nfia | Serpinh1 | Darc |
Cfl1 [30] | Gpr56 | Nfib [35] | Serpini1 | Ebf3 |
Chn2 | Gprc5c | Nfix [31,35] | Sfxn1 | Efnb2 [37] |
Chodl | Grb10 | Ngfr | Sgk3 | Elavl3 |
Cnot2 [35] | Grn | Nhsl1 | Sh3bp4 | Hmx1 |
Cntnap2 [32] | Gstm1 | Nme2 | Six3 | Kcnk1 |
Col18a1 | H19 [35] | Notch2 | Skap2 | Kif5c [32] |
Col2a1 [38,40] | H2afy2 | Npc2 | Slc1a3 | Klc1, LOC100047609 |
Crabp1 | Hbb-b1/Hbb-b2 | Olfm1 [32] | Slc1a4 | Meg3 |
Crmp1 | Hkdc1 | Olig2 | Slc32a1 | Pmepa1 |
Crym [41] | Hmgb2 [37] | Pak1 | Smad2 | Rian |
Csnk1e | Ier5 | Pax6 [30,31] | Smarce1 | Stmn1 |
Csrp1 [37] | Igfbp2 | Pbxip1 | Socs2 | Tbx2 |
Ctsc | Il17ra | Pcp4 | Sox5 | Vsx2 |
Cyp26a1 | Ina | Pcyox1 | Sox6 | Zfp532 |
Dag1 | Isl1 [31,37] | Pdlim5 | Sparc [31] | |
Dbi | Itgav | Phlpp1 | Spc25 |