Table 4 of Eidinger, Mol Vis 2015; 21:1295-1306.

Table 4. In silico analysis of PROM1 intron 21 acceptor-site.

Position Genotype
c.2281–6 C G C G
c.2281–26_-17 + + del del
Prediction tool Acceptor site scores
Splice Site Prediction by Neural Networka 0.90 0.49 0.47 Not scored
SplicePortb 0.038 −0.472 Not scored Not scored

aSplice Site Prediction by Neural Network threshold for acceptor splice site is 0.4 bSplicePort threshold for acceptor splice site is −10 del, deletion; +, no deletion

Eidinger, Mol Vis 2015; 21:1295-1306. http://www.molvis.org/molvis/v21/1295

©2015 Molecular Vision http://www.molvis.org/molvis/

ISSN 1090-0535