Table 1 of
King, Mol Vis 2015; 21:1235-1251. Table 1 of
King, Mol Vis 2015; 21:1235-1251.
Table 1. The list of genes with similar expression patterns across the BXD strains as RPE65.
| Symbol | Description | Location (Chr: Mb) | Mean Expr | Sample r |
|---|---|---|---|---|
| Rpe65 | retinal pigment epithelium 65 | Chr3: 159.262145 | 8.84 | 1.00 |
| Rgr | retinal G protein coupled receptor | Chr14: 37.850676 | 10.66 | 0.98 |
| Pon1 | paraoxonase 1 | Chr6: 5.118090 | 7.61 | 0.98 |
| Ttr | transthyretin | Chr18: 20.823751 | 10.86 | 0.95 |
| Ermn | ermin, ERM-like protein | Chr2: 57.897524 | 7.17 | 0.94 |
| Lrat | lecithin-retinol acyltransferase | Chr3: 82.696501 | 8.19 | 0.93 |
| Rdh5 | retinol dehydrogenase 5 | Chr10: 128.350646 | 8.76 | 0.92 |
| Slc6a20a | solute carrier family 6 | Chr9: 123.545240 | 8.36 | 0.92 |
| Trf | transferrin | Chr9: 103.106331 | 10.66 | 0.89 |
| Slc26a7 | solute carrier family 26, member 7 | Chr4: 14.429577 | 7.98 | 0.89 |
| Car12 | carbonic anyhydrase 12 | Chr9: 66.561493 | 7.90 | 0.89 |
| Clstn1 | calsyntenin 1 | Chr4: 148.960577 | 12.74 | -0.88 |
| Camk2b | calcium | Chr11: 5.869645 | 8.98 | -0.88 |
| Pkm | pyruvate kinase, muscle | Chr9: 59.504175 | 13.46 | -0.88 |
| Thbs1 | thrombospondin 1 | Chr2: 117.937612 | 8.37 | 0.88 |
| Snora17 | small nucleolar RNA, H/ACA box 17 | Chr2: 26.494759 | 6.27 | 0.87 |
| Abl1 | c-abl oncogene 1, non-receptor tyrosine kinase | Chr2: 31.543896 | 8.80 | -0.87 |
| Itgb8 | integrin beta 8 | Chr12: 120.396495 | 9.95 | 0.87 |
| Rrh | retinal pigment epithelium derived rhodopsin homolog | Chr3: 129.507326 | 10.40 | 0.87 |
| Tiam1 | T-lymphoma invasion and metastasis-inducing | Chr16: 89.787356 | 9.16 | -0.87 |
| Chchd3 | coiled-coil-helix-coiled-coil-helix domain containing 3 | Chr6: 32.740976 | 10.72 | 0.87 |
| Gm5567 | predicted gene 5567 | Chr6: 40.060252 | 9.84 | -0.87 |
| Hdac5 | histone deacetylase 5 | Chr11: 102.086139 | 10.80 | -0.87 |
| Cntn2 | contactin 2 | Chr1: 134.406002 | 8.84 | -0.87 |
| Olfr875 | olfactory receptor 875 | Chr9: 37.580222 | 7.60 | 0.87 |
| Gm19522 | predicted gene, 19522 | Chr16: 42.884483 | 7.57 | 0.87 |
| Gm19272 | predicted gene, 19272 | Chr6: 7.251908 | 6.40 | -0.87 |
| Sez6l2 | seizure related 6 homolog like 2 | Chr7: 134.094049 | 10.14 | -0.86 |
| Nrxn2 | neurexin II | Chr19: 6.418731 | 10.14 | -0.86 |
| Olfr726 | olfactory receptor 726 | Chr14: 50.703389 | 7.14 | 0.86 |
| Sv2a | synaptic vesicle glycoprotein 2 a | Chr3: 95.985074 | 12.28 | -0.86 |
| Tmem161b | transmembrane protein 161B | Chr13: 84.361901 | 10.91 | 0.86 |
| Pdcd5 | programmed cell death 5 | Chr1: 191.101187 | 11.26 | 0.86 |
| Fap | fibroblast activation protein | Chr2: 62.339000 | 7.19 | 0.86 |
| Cacna1g | calcium channel, voltage-dependent, | Chr11: 94.269705 | 9.95 | -0.86 |
| Rapgef1 | Rap guanine nucleotide exchange factor (GEF) 1 | Chr2: 29.475240 | 10.50 | -0.86 |
| Nsmce2 | non-SMC element 2 homolog | Chr15: 59.205753 | 10.91 | 0.86 |
| Plxna1 | plexin A1 | Chr6: 89.266307 | 10.09 | -0.86 |
| Ube2b | ubiquitin-conjugating enzyme E2B | Chr11: 51.798648 | 11.28 | 0.86 |
| Aacs | acetoacetyl-CoA synthetase | Chr5: 125.956184 | 9.52 | -0.86 |
| Acsf3 | acyl-CoA synthetase family member 3 | Chr8: 125.299405 | 9.51 | -0.86 |
| Slc17a7 | solute carrier family 17 | Chr7: 52.419291 | 13.14 | -0.86 |
| Srebf2 | sterol regulatory element binding factor 2 | Chr15: 81.977696 | 11.31 | -0.86 |
| Epb4.9 | erythrocyte protein band 4.9 | Chr14: 71.001070 | 9.98 | -0.86 |
| Vapa | vesicle-associated membrane protein, associated protein A | Chr17: 65.929392 | 12.32 | 0.85 |
| Slc12a5 | solute carrier family 12, member 5 | Chr2: 164.786302 | 12.12 | -0.85 |
| Card9 | caspase recruitment domain family, member 9 | Chr2: 26.207696 | 7.65 | -0.85 |
| Cfh | complement component factor h | Chr1: 141.982432 | 8.59 | 0.85 |
| Dagla | diacylglycerol lipase, alpha | Chr19: 10.319755 | 9.57 | -0.85 |
| Pde4dip | phosphodiesterase 4D interacting protein | Chr3: 97.493751 | 9.55 | -0.85 |
| Ank1 | ankyrin 1, erythroid | Chr8: 24.085316 | 9.54 | -0.85 |
| Zcchc14 | zinc finger, CCHC domain containing 14 | Chr8: 124.122603 | 10.39 | -0.85 |
| Ssr3 | signal sequence receptor, gamma | Chr3: 65.186870 | 6.09 | 0.85 |
| Mterfd1 | MTERF domain containing 1 | Chr13: 67.007904 | 9.55 | 0.85 |
| G3bp2 | GTPase activating protein (SH3 domain) binding protein 2 | Chr5: 92.052145 | 8.76 | 0.85 |
| Apba1 | amyloid beta (A4) precursor protein binding | Chr19: 23.833366 | 10.55 | -0.85 |
| Acot13 | acyl-CoA thioesterase 13 | Chr13: 24.909817 | 10.63 | 0.85 |
| Rbl1 | retinoblastoma-like 1 (p107) | Chr2: 156.971629 | 9.07 | 0.85 |
| Cpxm2 | carboxypeptidase X 2 (M14 family) | Chr7: 139.234493 | 8.07 | 0.85 |
| Mir467h | microRNA 467h | Chr9: 115.291078 | 6.80 | 0.85 |
| Ret | ret proto-oncogene | Chr6: 118.101766 | 10.23 | -0.85 |
| Mospd1 | motile sperm domain containing 1 | ChrX: 50.698185 | 10.71 | 0.85 |
| Lrp3 | low density lipoprotein receptor-related protein 3 | Chr7: 35.984852 | 9.10 | -0.85 |