Figure 1. Gels showing PCR-RFLP analysis of different SNPs of the TLR4 gene. The amplified products of the SNPs
rs4986790,
rs4986791,
rs10759931,
rs1927911, and
rs1927914 were digested with restriction enzymes
BccI,
BslI,
KpnI,
StyI and SphI, respectively. The restricted products were separated on 3% agarose gel, according to our previous report [
10].
A: For genotyping
rs4986790, the 140-bp PCR product was digested with BccI. The A allele is not cut by the enzyme, whereas the G allele yields 77 and
63 bp products.
B: For genotyping
rs4986791, the 110-bp PCR product was digested with BslI. The T allele is not cut by the enzyme, whereas the C allele yields 89 and
21 bp products.
C: For genotyping
rs1927911, the 203-bp PCR product was digested with StyI. The T allele is not cut by the enzyme, whereas the C allele yields 178 and
25 bp products.
D: For genotyping
rs10759931, the 241-bp PCR product was digested with KpnI. The A allele is not cut by the enzyme, whereas the G allele yields 190 and
51 bp products.
E: For genotyping
rs1927914, the 157-bp PCR product was digested with SphI. The T allele is not cut by the enzyme, whereas the C allele yields 90 and
67 bp products.