Table 3 of Ritchie, Mol Vis 2014; 20:1281-1295.
CHR | SNP | Reference Allele | Case MAF | Beta | P value | Gene | Left Gene | Right Gene | Type of Variant |
---|---|---|---|---|---|---|---|---|---|
12 | rs12296937 | G | 0.0267 | −1.08 | 6.39E-07 | ACSS3 | LIN7A | PPFIA2 | intron |
12 | rs2574730 | A | 0.0371 | −1.003 | 3.04E-06 | ACSS3 | LIN7A | PPFIA2 | intron |
12 | rs769056 | T | 0.0369 | 0.6454 | 3.39E-06 | ACSS3 | LIN7A | PPFIA2 | intron |
12 | rs11835432 | T | 0.1937 | 0.6667 | 7.64E-06 | NA | LOC100132564 | LOC644489 | NA |
1 | rs207145 | T | 0.1237 | −0.6722 | 7.9E-06 | NA | LOC645506 | GOT2L1 | NA |
12 | rs2593270 | A | 0.2593 | −1.263 | 1.06E-05 | NA | LOC100132564 | LOC644489 | NA |
12 | rs2656824 | G | 0.2529 | 0.7466 | 1.19E-05 | NA | LOC100132564 | LOC644489 | NA |
15 | rs4965818 | G | 0.3444 | −0.8272 | 1.37E-05 | SNRPA1 | SELS | PCSK6 | intron |
12 | rs337656 | T | 0.2225 | −0.7027 | 1.45E-05 | NA | LOC643264 | CLLU1OS | NA |
12 | rs10778791 | G | 0.0354 | −0.7015 | 2.08E-05 | ACSS3 | LIN7A | PPFIA2 | intron |
2 | rs12612521 | C | 0.2144 | −0.6601 | 0.000024 | NA | LOC728241 | LOC100131284 | NA |
2 | rs10932058 | C | 0.4981 | −0.7464 | 2.68E-05 | NA | LOC100132132 | LOC100132669 | NA |
15 | rs748696 | G | 0.4491 | −0.6481 | 2.98E-05 | KIAA1199 | FAM108C1 | LOC100128570 | intron |
15 | rs1524876 | T | 0.4568 | 0.7457 | 3.57E-05 | MTMR10 | MTMR15 | TRPM1 | intron |
15 | rs4778856 | G | 0.4667 | 0.7429 | 3.77E-05 | KIAA1199 | FAM108C1 | LOC100128570 | intron |
9 | rs2229594 | T | 0.1722 | 0.7258 | 3.95E-05 | BAAT | LOC347275 | LOC100128665 | utr-3 |
16 | rs933717 | T | 0.435 | 0.6402 | 0.000041 | FBXO31 | LOC730018 | MAP1LC3B | intron |
1 | rs6663771 | G | 0.4138 | 0.652 | 4.24E-05 | NA | SPATA17 | RRP15 | NA |
15 | rs1432442 | G | 0.0913 | 0.6621 | 0.000043 | MAP2K1 | ATP5J2P6 | SNAPC5 | intron |
5 | rs2468475 | T | 0.473 | −0.6838 | 4.59E-05 | NA | LOC100128659 | LOC729862 | NA |
4 | rs2406040 | G | 0.266 | 0.8714 | 4.59E-05 | NA | LOC646316 | LOC729578 | NA |
4 | rs2406041 | C | 0.2591 | −1.213 | 0.000051 | NA | LOC646316 | LOC729578 | NA |
2 | rs13414831 | G | 0.2974 | −2.441 | 5.34E-05 | NA | UBR3 | MYO3B | NA |
20 | rs864184 | A | 0.2301 | −1.864 | 0.000054 | PHACTR3 | LOC645605 | SYPC2 | intron |
4 | rs10517073 | T | 0.4173 | −2.027 | 5.98E-05 | ANAPC4 | ZCCHC4 | LOC645433 | intron |
18 | rs578026 | C | 0.3204 | −2.022 | 0.000061 | CLUL1 | CETN1 | C18orf56 | intron |
2 | rs16857804 | G | 0.2944 | −0.8456 | 6.24E-05 | NA | UBR3 | MYO3B | NA |
2 | rs4560089 | G | 0.3525 | 1.146 | 6.35E-05 | NA | LOC100130842 | MRPL50P1 | NA |
12 | rs934078 | A | 0.1049 | −1.048 | 6.57E-05 | NA | OSTF1P | TBX3 | NA |
1 | rs1416156 | A | 0.4182 | 0.8037 | 6.96E-05 | NA | SPATA17 | RRP15 | NA |
2 | rs617222 | A | 0.2478 | 0.8032 | 7.03E-05 | NA | LOC100129746 | EPHA4 | NA |
4 | rs2897305 | G | 0.2646 | 0.8959 | 7.06E-05 | NA | LOC646316 | LOC729578 | NA |
20 | rs6070943 | A | 0.1765 | −0.6294 | 7.23E-05 | PHACTR3 | LOC645605 | SYCP2 | intron |
1 | rs991007 | T | 0.1118 | 0.656 | 7.26E-05 | INADL | TM2D1 | L1TD1 | intron |
12 | rs12099972 | A | 0.0821 | 1.132 | 7.71E-05 | NA | LOC100129881 | LOC441644 | NA |
2 | rs9309489 | A | 0.2321 | −0.6522 | 7.86E-05 | NA | TACR1 | FAM176A | NA |
14 | rs1742707 | A | 0.4406 | 0.6657 | 7.97E-05 | NA | CPSF2 | SLC24A4 | NA |
17 | rs9908117 | C | 0.2586 | −0.7235 | 8.27E-05 | NA | LOC100128284 | WSCD1 | NA |
9 | rs7874443 | C | 0.3182 | −0.6617 | 8.34E-05 | NA | GOLM1 | LOC100130433 | NA |
2 | rs10195113 | T | 0.0657 | −0.7182 | 8.41E-05 | NA | SLC8A1 | LOC729984 | NA |
5 | rs1472606 | G | 0.3331 | −0.69 | 0.000085 | NA | SFXN1 | HRH2 | NA |
18 | rs7227421 | G | 0.0358 | −1.679 | 9.02E-05 | GNAL | LOC729602 | CHMP1B | intron |
10 | rs4388822 | T | 0.0717 | −0.7606 | 9.14E-05 | NA | LOC439992 | GRID1 | NA |
5 | rs2277939 | A | 0.3473 | −0.8382 | 9.34E-05 | SAP30L | GALNT10 | HAND1 | intron |