Molecular Vision: Ritchie, Mol Vis 2014; 20:1281-1295. Table 2

Table 2. PC adjusted case-control association analysis results.

CHR	SNP	Reference Allele	Case MAF	OR	P value	Gene	Left Gene	Right Gene	Type of Variant
16	rs8044853	T	0.335	0.7099	2.42E-06	NA	GAN	CMIP	NA
9	rs1929494	T	0.4391	1.217	2.46E-06	LOC100129210	ALDOB	C9orf125	intron
22	rs926937	A	0.045	0.8525	6.09E-06	NA	LOC100130624	MN1	NA
16	rs9927153	A	0.2391	0.8359	9.38E-06	NA	GAN	CMIP	NA
16	rs2098753	G	0.3183	0.8106	1.06E-05	NA	GAN	CMIP	NA
5	rs9292118	A	0.2659	1.193	1.17E-05	NA	LOC441073	MAP3K1	NA
1	rs16853148	A	0.059	1.28	0.000012	NA	PRDM2	RP1–21O18.1	NA
5	rs13178221	T	0.243	1.203	1.33E-05	NA	LOC441073	MAP3K1	NA
9	rs882809	T	0.3823	0.7482	1.48E-05	LOC100129210	ALDOB	LOC100129210	near-gene-5
10	rs9299674	G	0.3242	0.7436	1.53E-05	NA	LOC441550	LOC439953	NA
10	rs4301693	C	0.1521	1.184	1.84E-05	NA	LOC441550	LOC439953	NA
2	rs10197959	A	0.4305	0.8409	1.87E-05	DNER	PID1	LOC100130031	intron
16	rs1563655	A	0.3251	0.8514	2.04E-05	NA	GAN	CMIP	NA
2	rs4853633	T	0.1937	1.241	2.17E-05	NA	MSTN	MGC13057	NA
15	rs8027435	T	0.4498	1.235	2.23E-05	NA	ARRDC4	LOC728459	NA
3	rs13074058	C	0.0789	0.8423	0.000028	LOC285382	VPS8	EHHADH	intron
10	rs549676	C	0.4961	1.219	3.19E-05	NA	PITRM1	KLF6	NA
2	rs10864871	C	0.2922	0.7878	3.26E-05	NA	hCG_2045614	LOC728241	NA
6	rs9405313	A	0.1204	0.7855	3.31E-05	NA	LY86	RP11–320C15.1	NA
4	rs4695885	C	0.3323	1.222	3.96E-05	NA	LOC100128266	FBXO8	NA
4	rs2015977	A	0.4608	0.5185	4.08E-05	NA	LOC391656	LOC100131441	NA
16	rs310011	G	0.4267	0.8545	4.39E-05	NA	GAN	CMIP	NA
3	rs3732933	A	0.0718	1.181	4.42E-05	EHHADH	C3orf70	EIF2S2P2	reference
12	rs7963343	C	0.1752	1.203	4.49E-05	LOC100129881	CRADD	LOC441644	intron
20	rs6073358	T	0.0897	0.8249	4.57E-05	JPH2	TOX2	C20orf111	intron
18	rs7244678	C	0.0764	1.183	6.02E-05	IMPA2	MPPE1	LOC646044	intron
19	rs7252479	A	0.0516	0.8323	6.02E-05	ZNF578	LOC441862	ZNF808	intron
15	rs1993976	A	0.4469	0.7933	6.74E-05	NA	ARRDC4	LOC728459	NA
3	rs17008958	A	0.1439	0.7515	7.02E-05	EIF4E3	FOXP1	GPR27	intron
13	rs943386	G	0.324	1.258	7.13E-05	NA	LOC646208	LOC100130029	NA
17	rs4531770	C	0.1407	0.8437	0.000072	NA	hCG_1644301	FLJ37644	NA
5	rs3850653	A	0.2327	1.178	7.26E-05	NA	MEF2C	LOC729011	NA
1	rs10746432	A	0.4345	0.8413	7.53E-05	HHAT	LOC100129235	KCNH1	intron
5	rs160044	T	0.3105	1.232	7.62E-05	MEF2C	LOC645323	LOC729011	intron
3	rs1447899	T	0.2838	1.246	0.00008	EIF4E3	FOXP1	GPR27	intron
12	rs4831958	T	0.0711	0.8469	8.04E-05	NA	LOC100130336	LOC100131830	NA
4	rs6814129	G	0.4445	1.217	8.11E-05	NA	MRPS36P2	LOC644325	NA
9	rs12347205	A	0.3934	1.21	8.47E-05	NA	IL6RL1	OR7E31P	NA
9	rs951611	T	0.0095	0.8008	9.12E-05	NA	LOC286239	LOC401497	NA
1	rs4951508	T	0.2343	0.7486	9.58E-05	HHAT	LOC100129235	KCNH1	intron
6	rs9379053	A	0.1076	0.7166	9.65E-05	NA	LY86	RP11–320C15.1	NA
20	rs1337906	C	0.3422	1.179	9.84E-05	NA	RPL41P1	ST13P	NA
9	rs2148996	T	0.4654	0.8493	9.86E-05	NA	LOC392358	GAS1	NA
19	rs7247032	T	0.3922	0.7675	9.91E-05	NA	LOC100130084	USP29	NA
8	rs4268128	A	0.215	0.6761	9.97E-05	NA	TNFRSF10B	TNFRSF10C	NA