The identified proteins in corneal amyloid deposits, periamyloid corneal tissue, and healthy corneal stroma are listed according to emPAI values. The description (prot_desc) and protein accession name in the Swiss-Prot database (prot_acc) are available for each protein. The emPAI values are indicated for the endogenous proteins (emPAI^enp) and the common exogenous proteins (emPAI^cexp). Trypsin-3 (marked in bold) is classified as exogenous protein (emPAI^cexp (trypsin)). The molar fractions in percentages for the endogenous proteins (mol %^enp) are calculated. To access the data, click or select the words “Appendix 4.”