Table 3 of Dias, Mol Vis 2013; 19:654-664.

Table 3. Parallel NGS of 12 adRP-associated genes of four samples. Libraries for NGS obtained with Fragmentase technology.

Gene Chimerical Sample Sample 1 Sample 2 Sample 3
Average %
coverage Average % coverage Average %
coverage Average % coverage
total depth total depth total depth total depth
(max-min) (max-min) (max-min) (max-min)
CA4 316 100 50 97 85 100 76 100
(429–70) (73–20) (116–23) (114–26)
CRX 167 100 42 100 98 100 49 100
(267–72) (63–25) (133–38) (78–27)
IMPDH1 208 100 43 100 67 100 60 100
(351–76) (92–24) (169–25) (134–20)
NR2E3 180 100 28 100 21 49 22 100
(253–54) (46–21) (22–20) (43–20)
PAP1 310 100 81 100 58 100 100 100
(376–215) (116–36) (103–24) (132–50)
PRPF31 113 100 51 100 32 100 55 100
(182–42) (102–25) (143–27) (116–21)
PRPF3 140 100 52 100 72 100 68 100
(216–34) (187–49) (203–27) (156–22)
PRPF8 212 98 73 100 140 96 90 99
(489–20) (185–26) (515–20) (149–20)
PRPH2 86 100 44 100 52 100 68 100
(110–39) (58–29) (90–24) (82–38)
RHO 90 100 80 100 38 100 70 100
(138–41) (137–49) (53–21) (113–36)
RP1 147 100 29 92 23 96 71 96
(223–28) (58–20) (73–20) (175–20)
TOPORS 213 100 116 100 327 100 110 100
(281–50) (187–49) (507–107) (179–20)

Dias, Mol Vis 2013; 19:654-664. http://www.molvis.org/molvis/v19/654

©2013 Molecular Vision http://www.molvis.org/molvis/

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