Table 2 of
Dias, Mol Vis 2013; 19:654-664.
Table 2. Mutation detection in single and parallel NGS.
Gene | Protein change | Number of samples/Pico titer plate | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
1 | 4 | ||||||||||
Chimeric sample | Chimeric sample | Sample 1 | Sample 2 | Sample 3 | |||||||
% | Total | % | Total | % | Total | % | Total | % | Total | ||
Variant | Depth | Variant | Depth | Variant | Depth | Variant | Depth | Variant | Depth | ||
CA4 | p.Val234Ile | 44 | 280 | 48 | 222 | 0* | - | 0* | - | 0* | - |
CRX | None (c.252+11G>A) | 50 | 99 | 48 | 67 | 0* | - | 0* | - | 0* | - |
PRPF31 | p.Lys257fsX277 | 47 | 76 | 46 | 57 | 0* | - | 0* | - | 0* | - |
p.Ile109del | 0* | - | 0* | - | 47 | 25 | 0* | - | 0* | - | |
PRPF8 | p.Val2325fsX2329 | 36 | 101 | 34 | 44 | 0* | - | 0* | - | 0* | - |
PRPH2 | p.Cys214Tyr | 40 | 48 | 67 | 27 | 0* | - | 0* | - | 0* | - |
p.Asp338Gly | 0* | - | 0* | - | 100 | 15 | 29 | 17 | 100 | 16 | |
p.Gln304Glu | 0* | - | 0* | - | 96 | 27 | 28 | 25 | 100 | 32 | |
p.Arg310Lys | 0* | - | 48 | 40 | 100 | 25 | 92 | 24 | 96 | 28 | |
RHO | p.Asn73del | 0* | - | 0* | - | 0* | - | 0* | - | 38 | 56 |
RP1 | p.Cys2033Tyr | 0* | - | 0* | - | 55 | 33 | 50 | 40 | 41 | 83 |
p.Asn985Tyr | 0* | - | 0* | - | 60 | 20 | 53 | 17 | 46 | 55 | |
p.Ala1670Thr | 0* | - | 71 | 119 | 0* | - | 0* | - | 30 | 54 | |
p.Ser1691Pro | 0* | - | 100 | 122 | 0* | - | 0* | - | 49 | 53 |