Table 1 of
Micheal, Mol Vis 2013; 19:441-xxx.
Table 1. Primers and restriction enzymes used to genotype MMP polymorphisms
SNP | Forward primer | C† | PCR product | R. E | RFLP fragments | Ref |
---|---|---|---|---|---|---|
MMP-1=(rs1799750) c.-1607–1606insGG | TGACTTTTAAAACATAGTCTATGTTCA | 58 | 269 | AluI | 1G/1G=241,28 2G/2G=269 | [23] |
TCTTGGATTGATTTGAGATAAGTCATAGA | ||||||
MMP-7=(rs11568818) c.-181T>C | TGGTACCATAATGTCCTGAATG | 65 | 150 | EcoRI | T=150 C=120,30 | [15] |
TCGTTATTGGCAGGAAGCACACAATGAATT | ||||||
MMP-9=(rs3918242) c.-1562C>T | GCCTGGCACATAGTAGGCCC | 58 | 436 | SphI | C=436 T=242,194 | [24] |
CTTCCTAGCCAGCCGGCATC | ||||||
MMP-9=(rs17576) c.836A>G | GAGAGATGGGATGAACTG | 58 | 439 | MspI | A=252,187 G=187, 129, 123 | [25] |
GTGGTGGAAATGTGGTGT |