Table 2 of Kim, Mol Vis 2012; 18:2398-2410.
Gene | Amino acid | Nucleotide | Proband (336) | Control (360) | PolyPhen-2 | SIFT | Reference | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
Hetero | Homo | Frequency | Hetero | Homo | Frequency | ||||||
PRPF3 | p.T494M | c.1481C>T | 1 | 0 | 0.001 | 0 | 0 | 0 | prob/prob | Damaging | [17,38] |
RHO | p.T17M | c.50C>T | 1 | 0 | 0.001 | 0 | 0 | 0 | prob/poss | *Damaging | [18,39] |
p.R135W | c.403C>T | 1 | 0 | 0.001 | 0 | 0 | 0 | prob/prob | *Damaging | [19,20] | |
p.D190N | c.568G>A | 1 | 0 | 0.001 | 0 | 0 | 0 | poss/poss | *Damaging | [21] | |
p.K296N | c.888G>T | 1 | 0 | 0.001 | 0 | 0 | 0 | prob/prob | *Damaging | [18,24] | |
p.P347L | c.1040C>T | 2 | 0 | 0.003 | 0 | 0 | 0 | poss/benign | *Damaging | [18,40] | |
PDE6B | p.H557Y | c.1669C>T | 9 | 4 | 0.025 | 2 | 0 | 0.003 | prob/prob | Damaging | [20,22] |
p.T604I | c.1811C>T | 4 | 0 | 0.006 | 3 | 0 | 0.004 | prob/prob | Damaging | [20] | |
PRPH2 | p.W316G | c.946T>G | 1 | 0 | 0.001 | 1 | 0 | 0.001 | benign/benign | Damaging | [20] |
RP1 | p.G706R | c.2116G>C | 1 | 0 | 0.001 | 1 | 0 | 0.001 | benign/benign | Tolerated | [25] |
p.D984G | c.2951A>G | 1 | 0 | 0.001 | 0 | 0 | 0 | poss/benign | Tolerated | [23] | |
CRX | p.G122D | c.365G>A | 3 | 0 | 0.004 | 3 | 0 | 0.004 | benign/benign | Tolerated | [20,24] |