Table 5 of
Mykkänen, Mol Vis 2012; 18:2338-2351. Table 5 of
Mykkänen, Mol Vis 2012; 18:2338-2351.
Table 5. Gene set enrichment analyses (GSEA) of retinal expression in C57BL mice fed normal control diet (NCD), high fat diet (HFD) or bilberries (BB) in these diets for 12 weeks.
| Limit1 | Term | Count | Fold enrichment | p-value2 |
|---|---|---|---|---|
| HFD versus NCD | ||||
| upregulated (n=431, 2 unknown) | ||||
| Dilated cardiomyopathy | 7 | 3.5 | 0.01 | |
| Hypertrophic cardiomyopathy (HCM) | 6 | 3.3 | 0.03 | |
| MAPK signaling pathway | 11 | 1.9 | 0.06 | |
| down regulated (n=374, 3 unkwown) | ||||
| Apoptosis | 11 | 6.2 | 0 | |
| Calcium signaling pathway | 10 | 2.6 | 0.02 | |
| Melanogenesis | 6 | 2.9 | 0.05 | |
| Long-term potentiation | 5 | 3.5 | 0.05 | |
| HFD+BB versus NCD | ||||
| upregulated (n=395, 2 unknown) | ||||
| Systemic lupus erythematosus | 7 | 3.5 | 0.01 | |
| Colorectal cancer | 6 | 3.6 | 0.02 | |
| down regulated (n=410, 3 unknown) | ||||
| Apoptosis | 10 | 5 | 0 | |
| Calcium signaling pathway | 10 | 2.3 | 0.03 | |
| Gap junction | 6 | 3.2 | 0.05 | |
| HFD+BB versus HFD: | ||||
| upregulated (n=393, 1 unknown) | ||||
| Systemic lupus erythematosus | 7 | 3.4 | 0.02 | |
| down regulated (n=412, 4 unknown) | ||||
| Apoptosis | 9 | 4.7 | 0 | |
| NCD+BB versus NCD: | ||||
| upregulated (n=416, 2 unknown) | ||||
| Systemic lupus erythematosus | 8 | 3.6 | 0.01 | |
| down regulated (n=389, 3 unknown) | ||||
| Apoptosis | 9 | 5.1 | 0 | |
| MAPK signaling pathwway | 11 | 2 | 0.04 | |
| Calcium signaling pathway | 9 | 2.3 | 0.04 | |