Table 3 of Fink, Mol Vis 2012; 18:2229-2240.

Table 3. Haplotype association (BTA18).

Haplotype     Frequency (%)    
1 2 3 4 5 Frequency total (%) Standard error Controls Cases χ2 p
G G A G A 23.01 0.041 7.40 27.26 6.92 0.009
G G G G A 18.31 0.038 10.03 24.68 3.68 0.055
G G A G G 17.12 0.037 25.87 13.34 3.07 0.080
A G A A A 7.75 0.026 0 8.59 3.92 0.048
G G A A A 7.68 0.026 21.63 3.69 13.93 <0.001
G G G A G 6.41 0.024 7.79 6.90 0.17 0.680
G G A A G 3.41 0.018 5.29 0 2.54 0.111
A G G A A 3.31 0.018 4.35 2.92 0.18 0.670
A G G G A 3.18 0.017 0 5.28 2.34 0.126
G A A A A 2.37 0.015 1.99 0 1.44 0.231
A G A G G 1.07 0.010 0 1.86 0.84 0.361

Frequencies of the haplotypes with at least 1% in the sample of 52 German Brown cattle and their standard errors, haplotype frequencies of cases and controls and their associations with BCSE on bovine chromosome 18 are shown. In the haplotype column, 1=ARS-BFGL-NGS-93837; 2=Hapmap42211-BTA-43910; 3=ARS-BFGL-BAC-31654; 4=ARS-BFGL-NGS-1786; 5=ARS-BFGL-NGS-41595.

Fink, Mol Vis 2012; 18:2229-2240. http://www.molvis.org/molvis/v18/a236

©2012 Molecular Vision http://www.molvis.org/molvis/

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