Table 2 of
Abu-Amero, Mol Vis 2012; 18:1955-1959. Table 2 of
Abu-Amero, Mol Vis 2012; 18:1955-1959.
Table 2. Primers used for mitochondrial haplogrouping.
Primer # |
Primer sequence |
Annealing temp. |
Product size |
|---|---|---|---|
| MIT-1-F | CCTCCCTGTACGAAAGGACA | 57 | 614 |
| MIT-1-R | TGAGATTGTTTGGGCTACTGC | ||
| MIT-2-F | CGAGCAGTAGCCCAAACAAT | 57 | 664 |
| MIT-2-R | TTTTGGATTCTCAGGGATGG | ||
| MIT-3-F | CCATCCCTGAGAATCCAAAA | 57 | 653 |
| MIT-3-R | ATTTTGCGTAGCTGGGTCTG | ||
| MIT-4-F | TAAACCAGACCCAGCTACGC | 55 | 661 |
| MIT-4-R | AAAGTGGCTGATTTGCGTTC | ||
| MIT-5-F | TCAACTGAACGCAAATCAGC | 60 | 784 |
| MIT-5-R | TGAAATTGATGGCCCCTAAG | ||
| MIT-6-F | CTTAGGGGCCATCAATTTCA | 57 | 705 |
| MIT-6-R | AAGCCTCCTATGATGGCAAA | ||
| MIT-7-F | GCCATCATAGGAGGCTTCATT | 59 | 702 |
| MIT-7-R | TTTCCTGAGCGTCTGAGATGT | ||
| MIT-8-F | CATCTCAGACGCTCAGGAAA | 55 | 730 |
| MIT-8-R | GGGAGGTAGGTGGTAGTTTGTG | ||
| MIT-9-F | TACTACCGTATGGCCCACCA | 60 | 781 |
| MIT-9-R | AGGCTTGGATTAAGGCGACA | ||
| MIT-10-F | ACTGACTATCCTAGAAATCGCTGT | 59 | 741 |
| MIT-10-R | GCAGATAGTGAGGAAAGTTGAGC | ||
| MIT-11-F | CCACGGACTTCACGTCATTA | 59 | 743 |
| MIT-11-R | GGGAGGATATGAGGTGTGAGC | ||
| MIT-12-F | GCATTTACCATCTCACTTCTAGG | 57 | 751 |
| MIT-12-R | AGTGCGATGAGTAGGGGAAG | ||
| MIT-13-F | AGGCACATACTTCCTATTCTACACC | 55 | 740 |
| MIT-13-R | TGATATTTGATCAGGAGAACGTG | ||
| MIT-14-F | ACTGGGAGAACTCTCTGTGCT | 55 | 740 |
| MIT-14-R | ACGAACAATGCTACAGGGATG | ||
| MIT-15-F | TCCATAATATTCATCCCTGTAGCA | 57 | 741 |
| MIT-15-R | GTGGGTACAGATGTGCAGGA | ||
| MIT-16-F | GTTACAATCGGCATCAACCA | 55 | 740 |
| MIT-16-R | AGCTTTTCTAGTCAGGTTAGGTCTA | ||
| MIT-17-F | CCTCAACCCAAAAAGGCATA | 59 | 745 |
| MIT-17-R | GGAGGTCGATGAATGAGTGG | ||
| MIT-18-F | ACGCAAAATTAACCCCCTAA | 59 | 742 |
| MIT-18-R | GCCTAGGAGGTCTGGTGAGA | ||
| MIT-19-F | CCTAGGCGACCCAGACAAT | 59 | 740 |
| MIT-19-R | GATAGTTGAGGGTTGATTGCTGTA | ||
| MIT-20-F | TGCTTACAAGCAAGTACAGCAAT | 57 | 370 |
| MIT-20-R | TGATGTCTTATTTAAGGGGAACG | ||
| MIT-21-F | GGCTCACATCACCCCATAAA | 55 | 720 |
| MIT-21-R | CATGGGCTACACCTTGACCT | ||
| MIT-22-F | GCAAACCCTGATGAAGGCTA | 57 | 632 |
| MIT-22-R | GGGGTCTTAGCTTTGGCTCT | ||
| MIT-23-F | ACTTTGCAAGGAGAGCCAAA | 59 | 672 |
| MIT-23-R | AGGCGGTGCCTCTAATACTG | ||
| MIT-24-F | TCACCTCTAGCATCACCAGTATT | 57 | 660 |
| MIT-24-R | GGAAGGCGCTTTGTGAAGTA | ||
| HVS-I-F | ACT TCA CAA CAA TCC TAA TCC T | 60 | 1200 |
| HVS-I-R | CGG AGC GAG GAG AGT AGC AC | ||
| HVS-II-F | CAT TTA CCG TAC ATA GCA CA | 60 | 820 |
| HVS-II-R | GGG AGG GGG TGA TCT AAA AC |