Table 2 of Chen, Mol Vis 2012; 18:1629-1639.
MAF (%) | Genotype counts † | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Region | Gene | dbSNP ID | Allele * | POAG | Control | p-value | Odds ratio (95% CI) | POAG | Control | p-value |
1q43 | ZP4 ‡ | rs693421 | T/G | 45.9 | 46.5 | 0.89 | 0.98 (0.74–1.29) | 37/95/52 | 48/118/64 | 0.98 |
2p16.3 | LOC730100 ‡ | rs1533428 | T/C | 44.3 | 38.4 | 0.10 | 1.27 (0.96–1.68) | 34/95/55 | 39/98/92 | 0.088 |
2p16.3 | LOC730100 ‡ | rs12994401 | T/C | 36.9 | 34.3 | 0.46 | 1.12 (0.84–1.49) | 22/91/70 | 28/101/100 | 0.49 |
9q33.1 | TLR4 | rs7037117 | G/A | 20.1 | 20.2 | 0.99 | 0.99 (0.71–1.40) | 14/46/124 | 8/77/145 | 0.049 |
9q33.3 | LMX1B | rs944103 | G/A | 4.9 | 2.2 | 0.035 | 2.31 (1.06–5.08) | 0/18/166 | 0/10/220 | 0.029 |
9q33.3 | LMX1B | rs7854658 | T/C | 0.3 | 0 | 0.44 | - | 0/1/183 | 0/0/230 | 0.44 |
9q33.3 | LMX1B | rs16929236 | G/A | 39.3 | 40.9 | 0.67 | 0.94 (0.71–1.24) | 25/94/64 | 36/116/78 | 0.85 |
9q33.3 | LMX1B | rs10733682 | G/A | 26.9 | 25.3 | 0.63 | 1.09 (0.79–1.48) | 11/77/96 | 21/74/134 | 0.10 |
9q33.3 | LMX1B | rs867559 | T/C | 30.2 | 29.8 | 0.94 | 1.02 (0.76–1.37) | 17/77/90 | 21/95/114 | 0.99 |
10p12.31 | PLXDC2 ‡ | rs7081455 | G/T | 15.5 | 12.8 | 0.31 | 1.25 (0.84–1.85) | 3/51/130 | 1/57/172 | 0.35 |
12q21.31 | TMTC2 | rs7961953 | A/G | 40.8 | 37.4 | 0.35 | 1.15 (0.87–1.53) | 30/90/64 | 29/114/87 | 0.54 |
14q32.2 | CYP46A1 | rs754203 | C/T | 30.4 | 33.9 | 0.29 | 0.85 (0.63–1.15) | 17/78/89 | 27/100/100 | 0.56 |