Table 5 of Yip, Mol Vis 2011; 17:810-821.
Table 5. Allelic association tests of COL11A1 and COL18A1 SNPs genotyped individually.
Alleles* | Genotype counts (11/12/22)* | HWE test (p value) | Minor allele freq | Allelic test† | ||||||
---|---|---|---|---|---|---|---|---|---|---|
SNP | 1 | 2 | Cases | Controls | Cases | Controls | Cases | Controls | OR (95% CI) | p value |
COL11A1 | ||||||||||
rs17127311 | A | G | 206/74/5 | 165/89/2 | 0.8128 | 0.0054 | 0.1474 | 0.1816 | – ‡ | – ‡ |
COL18A1 | ||||||||||
rs2838922 | C | T | 197/75/26 | 174/91/28 | 4.47E-05 | 0.0047 | 0.2131 | 0.2509 | – ‡ | – ‡ |
rs11911327 | C | T | 197/89/10 | 192/97/7 | 1.0000 | 0.2524 | 0.1841 | 0.1875 | 0.98 (0.72 - 1.33) | 0.8979 |
rs2236454 | C | T | 74/131/90 | 79/144/73 | 0.0621 | 0.6431 | 0.5271 | 0.4899 | 1.15 (0.92 - 1.44) | 0.2132 |
rs2236457 | C | T | 183/94/22 | 180/93/14 | 0.0508 | 0.7221 | 0.2308 | 0.2108 | 1.10 (0.84 - 1.44) | 0.5011 |
rs2236475 | A | G | 184/88/22 | 176/96/21 | 0.0187 | 0.1427 | 0.2245 | 0.2355 | 0.93 (0.71 - 1.20) | 0.5672 |