Table 3 of Yip, Mol Vis 2011; 17:810-821. Table 3 of Yip, Mol Vis 2011; 17:810-821.
Table 3. Primers for genotyping individual samples.
| Gene, SNP | Primer sequences (5′>3′)* |
|---|---|
| MassArray iPLEX Gold assay (Sequenom) | |
| COL11A1, rs17127311 | F: ACGTTGGATGCCTTTAGACTTCACATTCTC |
| R: ACGTTGGATGGTATTAAGGAAAAAGCAAAGC | |
| PE primer: cccacGGAAAAAGCAAAGCAAAGTGATG | |
| COL18A1, rs11911327 | F: ACGTTGGATGTTTGCGTGGCTGCCTGGCCT |
| R: ACGTTGGATGGACTCACAGATGCCTTTTGC | |
| PE primer: caTTCCCACAGCGCTGC | |
| COL18A1, rs2236454 | F: ACGTTGGATGCAGAAGCCAAGGACAGAAAC |
| R: ACGTTGGATGATTGGGTCCGGACGGAATG | |
| PE primer: aaagcGATCCAGGAAACTCCCC | |
| COL18A1, rs2236457 | F: ACGTTGGATGGCTACAGGAGAGCACAGAAA |
| R: ACGTTGGATGTCTATGACAGGAAAAGTCCC | |
| PE primer: aacaCCAAAATATACCACTTGGGG | |
| COL18A1, rs2236475 | F: ACGTTGGATGGCCAGTACCCAGGAGGAAG |
| R: ACGTTGGATGTGACTGAGCCTAGCACACAC | |
| PE primer: ggacGGCCCACTGCCCTGTCTGCC | |
| Restriction fragment length polymorphism | |
| COL18A1, rs2838922 | F: CTGCTTCCCCACCTTTTCAC |
| R: (T)20 CTGAGATGTGAGAATCGCTCGA | |