Table 3 of Cheng, Mol Vis 2011; 17:448-455. Table 3 of Cheng, Mol Vis 2011; 17:448-455.
Table 3. Total CNVs identified in the genome of this individual.
| Number | Chromosome | Cytoband | Start | Stop | Size | Duplication | Deletion | Gene names |
|---|---|---|---|---|---|---|---|---|
| 1 | chr1 | q21.3 | 150822873 | 150848709 | 25836 | 2.044245 | 0 | LCE3C |
| 2 | chr3 | p12.3 | 75895820 | 75958100 | 62280 | 0 | −0.682351 | ZNF717 |
| 3 | chr3 | q26.1 | 164038717 | 164101976 | 63259 | 0 | −0.921074 | |
| 4 | chr3 | q29 | 196943180 | 196950295 | 7115 | 0 | −0.784749 | MUC20, MUC20 |
| 5 | chr4 | q13.2 | 69057535 | 69166014 | 108479 | 0 | −4.405964 | UGT2B17 |
| 6 | chr4 | q28.3 | 131700605 | 131865354 | 164749 | 0 | −0.598187 | |
| 7 | chr5 | p15.33 | 802318 | 878490 | 76172 | 0.667749 | 0 | ZDHHC11 |
| 8 | chr5 | q13.2 | 69741118 | 70422497 | 681379 | 0 | −1.028287 | GTF2H2C, GTF2H2B, GTF2H2D, SERF1A, SERF1A, SERF1B, SMN1, SMN2, SMN1, SMN2, NAIP, GTF2H2B, GTF2H2C, GTF2H2, GTF2H2D, OCLN, LOC647859 |
| 9 | chr6 | p22.1 | 29201691 | 29260945 | 59254 | 0 | −1.115529 | OR2J2 |
| 10 | chr6 | p21.32 | 32567182 | 32660290 | 93108 | 0 | −2.059653 | HLA-DRB5, HLA-DRB6, HLA-DRB1 |
| 11 | chr6 | p21.32 | 32595202 | 32605500 | 10298 | 0 | −4.758382 | HLA-DRB5 |
| 12 | chr6 | p12.1 | 55468168 | 55501199 | 33031 | 0 | −0.627628 | HMGCLL1 |
| 13 | chr7 | p22.3 | 140013 | 225040 | 85027 | 0.843971 | 0 | |
| 14 | chr7 | q21.2 | 92484285 | 92530356 | 46071 | 0 | −0.870801 | |
| 15 | chr7 | q32.3 - q33 | 132382438 | 132457449 | 75011 | 0 | −1.214264 | CHCHD3 |
| 16 | chr7 | q34 | 141413152 | 141438704 | 25552 | 1.057004 | 0 | MGAM |
| 17 | chr7 | q34 | 142158954 | 142171818 | 12864 | 0 | −2.550414 | TRY6 |
| 18 | chr8 | p11.23 - p11.22 | 39356395 | 39505456 | 149061 | 1.698241 | 0 | ADAM5P, ADAM3A |
| 19 | chr11 | p13 | 31074403 | 31640263 | 565860 | 0 | −1.081172 | DCDC1, DNAJC24, IMMP1L, ELP4 |
| 20 | chr11 | q11 | 55124530 | 55195190 | 70660 | 0 | −0.554403 | OR4C11, OR4P4, OR4S2, OR4C6 |
| 21 | chr12 | p13.31 | 9528390 | 9585356 | 56966 | 1.893183 | 0 | |
| 22 | chr14 | q32.33 | 105602556 | 105630289 | 27733 | 0 | −3.599436 | |
| 23 | chr14 | q32.33 | 105962105 | 105985658 | 23553 | 0.992122 | 0 | |
| 24 | chr15 | q11.2 | 18809804 | 18884636 | 74832 | 0.536094 | 0 | |
| 25 | chr15 | q11.2 | 19845742 | 20080135 | 234393 | 0.435061 | 0 | LOC727924, OR4M2, OR4N4, LOC650137 |
| 26 | chr16 | p13.3 | 2638381 | 2672274 | 33893 | 0.722366 | 0 | |
| 27 | chr16 | p13.11 | 14955977 | 15023221 | 67244 | 0 | −0.94928 | PDXDC1 |
| 28 | chr16 | q12.2 | 54354443 | 54380034 | 25591 | 0 | −0.650633 | CES4 |
| 29 | chr16 | q22.1 | 68706040 | 68754434 | 48394 | 0 | −0.495966 | PDPR |
| 30 | chr17 | q21.31 - q21.32 | 41553026 | 42049740 | 496714 | 0 | −0.347977 | KIAA1267, LRRC37A, ARL17, ARL17, LRRC37A2, ARL17P1, ARL17P1, ARL17, NSF |
| 31 | chr17 | q25.3 | 77422498 | 77503885 | 81387 | 0.905508 | 0 | ARHGDIA, THOC4, ANAPC11, ANAPC11, NPB, PCYT2, SIRT7, MAFG, MAFG, LOC92659, PYCR1, PYCR1, MYADML2, NOTUM |
| 32 | chr19 | p12 | 20422376 | 20493601 | 71225 | 0 | −0.809494 | |
| 33 | chr20 | p13 | 1516766 | 1539355 | 22589 | 0 | −1.330169 | SIRPB1, SIRPB1 |
| 34 | chr22 | q12.3 | 35217849 | 35225862 | 8013 | 0.921708 | 0 | FOXRED2, FOXRED2 |
| 35 | chr22 | q13.1 | 37688858 | 37715585 | 26727 | 0 | −0.689394 | APOBEC3A, APOBEC3B |