Table 1 of
Rizel, Mol Vis 2011; 17:3548-3555. Table 1 of
Rizel, Mol Vis 2011; 17:3548-3555.
Table 1. Microsatellite repeat markers linked to all known USH1 loci.
| Locus | Chromosome | Gene and markers | Location (MB) | PCR primers for marker amplification |
|---|---|---|---|---|
| USH1B | 11 | D11S4179 | 76 | F: GGATGTAAGAGTAACTGGCTCG |
| R: GAAAATGTTCTGCCTGAGGG | ||||
| D11S1789 | 76.7 | F: ACCAGGAAATTGAGAACCA | ||
| R: TCTGGCCCAACAGAAGT | ||||
| D11S4079 | 76.8 | F: CAGCAAGATCCTGTCTCAA | ||
| R: CTCCTTAAAGTGGGGGAGTT | ||||
| MYO7A | 76.8–76.9 | |||
| D11S937 | 77.5 | F: CTAATAAACAAATCCCTCTACCTCC | ||
| R: TAGTCAGTCAGGGACCCAAGT | ||||
| USH1C | 11 | D11S902 | 17.4 | F: CCCGGCTGTGAATATACTTAATGC |
| R: CCCAACAGCAATGGGAAGTT | ||||
| USH1C | 17.5 | |||
| D11S4138 | 17.7 | F: GTGCTGACCGCTCCAAGG | ||
| R: CCAAAGGGGTTAATAGGGGTCCA | ||||
| USH1D | 10 | D10S537 | 72 | F: CCTACTGTGCCTGGCTAGA |
| R: ATTTGGATGAAACCCACG | ||||
| D10S606 | 73 | F: TTTGAACCTGGGAGACG | ||
| R: CATGGACATTCTGCTGC | ||||
| D10S1694 | 73.1 | F: CCTGTCTGGCCCAGGTA | ||
| R: AGTAGGGGTGCTGCTTGA | ||||
| CDH23 | 73.1–73.5 | |||
| USH1E | 21 | D21S1437 | 20.5 | F: ATGTACATGTGTCTGGGAAGG |
| R: TTCTCTACATATTTACTGCCAACA | ||||
| USH1E (locus) | 19.8–31.3 | |||
| D21S265 | 25.8 | F: TTAAAGCAATCAATCATGG | ||
| R: GGGTTCTGTGAATATGGG | ||||
| USH1F | 10 | D10S2537 | 55.7 | F: AAATGGAATATGGGGTTATTAGCA |
| R: AATTATCTACATTTCCGCCACTTC | ||||
| D10S546 | 55.7 | F: TGTGATGACTAGAAATTCAGTTCA | ||
| R: ACTTCTCAATTACAGGCCCA | ||||
| PCDH15 | 55.5–56.5 | |||
| D10S2522 | 56.3 | F: TTTAAACACTGTCCCAACAC | ||
| R: TGAAGGAAAGCCAAACTTA | ||||
| USH1G | 17 | D17S1301 | 70.2 | F: AAAGAAGATGAAATTGCCATG |
| R: TAAAAAGAATGAAGGTAAAAATGTG | ||||
| D17S785 | 71.9 | F: ATCCCTGGAGAGTGAAAATG | ||
| R: AAGGCCAACCTGAAAACTAA | ||||
| D17S801 | 72 | F: CCTCAAACCGGACAACTATTT | ||
| R: CAGAGAGCAAGATCCTACCTC | ||||
| D17S937 | 72.8 | F: CATGGAGGGACTTGCG | ||
| R: TTCCCAGAACCCGGTTT | ||||
| USH1G | 72.9 | |||
| USH1H | 15 | USH1H (locus) | 65.1–68.4 | |
| D15S1015 | 65.6 | F: TCACAGAGCGAGACCCTAT | ||
| R: CACAGACTCAGTTTAGACAGAAATC | ||||
| D15S131 | 68.9 | F: GAAAGGCACCTCATCTCG | ||
| R: TTAAAAACTCTGGAGCAGCG |