Table 2 of Xia, Mol Vis 2011; 17:2920-2933.


Table 2. Canonical pathway–based analyses of gene expression data in retinas, KEGG was used to identify the genes significantly associated with canonical pathways in the KEGG pathways database.

Name p value Genes involved (p<0.05. Fold change>2)
Allograft rejection 0 FAS, MAMU-A, MAMU-B18, MAMU-I
Antigen processing and presentation 0 B2M, MAMU-A, MAMU-B18, MAMU-I, LOC719379, LOC717726
Complement and coagulation cascades 0.0119 C1S, SERPING1
Graft-versus-host disease 0 FAS, MAMU-A, MAMU-B18, MAMU-I
P53 signaling pathway 0.001 DDB2, FAS, GADD45B,
Type I diabetes mellitus 0 FAS, MAMU-A, MAMU-B18, MAMU-I
Autoimmune thyroid disease 0.0004 FAS, MAMU-A, MAMU-I, MAMU-B18
Viral myocarditis 0.0028 MAMU-A, MAMU-B18, MAMU-I
Endocytosis 0.0021 MAMU-A, MAMU-B18, MAMU-I, PSD2
Cell adhesion molecules(CAMs) 0.0069 MAMU-A,MAMU-B18,MAMU-I, CLDN18
Natural killer cell mediated cytotoxicity 0.0007 FAS,MAMU-A,MAMU-B18,MAMU-I
Cytokine-cytokine receptor interaction 0.0004 CCL8,CXCL10, FAS,IL7,OSMR,MCP-1,CLDN18
Primary immunodeficiency 0.0041 BLNK, LOC717726
RIG-I-like receptor signaling pathway 0.0007 CXCL10, IFIH1,ISG15
NOD-like receptor signaling pathway 0.0016 CCL18, MCP-1
Chemokine signaling pathway 0.0128 CCL8, CXCL10, MCP-1
Peroxisome 0.0165 GNPAT, LOC574097
MAPK signaling pathway 0.0269 BDNF, FAS, GADD45B
Primary bile acid biosynthesis 0.0385 CH25H