Table 1 of Abu-Amero, Mol Vis 2011; 17:2171-2176.


Table 1. Primers used for Mitochondrial Haplogrouping.

Primer # Primer Sequence Annealing temp. Product size
MIT-1-F CCTCCCTGTACGAAAGGACA 57 614
MIT-1-R TGAGATTGTTTGGGCTACTGC    
MIT-2-F CGAGCAGTAGCCCAAACAAT 57 664
MIT-2-R TTTTGGATTCTCAGGGATGG    
MIT-3-F CCATCCCTGAGAATCCAAAA 57 653
MIT-3-R ATTTTGCGTAGCTGGGTCTG    
MIT-4-F TAAACCAGACCCAGCTACGC 55 661
MIT-4-R AAAGTGGCTGATTTGCGTTC    
MIT-5-F TCAACTGAACGCAAATCAGC 60 784
MIT-5-R TGAAATTGATGGCCCCTAAG    
MIT-6-F CTTAGGGGCCATCAATTTCA 57 705
MIT-6-R AAGCCTCCTATGATGGCAAA    
MIT-7-F GCCATCATAGGAGGCTTCATT 59 702
MIT-7-R TTTCCTGAGCGTCTGAGATGT    
MIT-8-F CATCTCAGACGCTCAGGAAA 55 730
MIT-8-R GGGAGGTAGGTGGTAGTTTGTG    
MIT-9-F TACTACCGTATGGCCCACCA 60 781
MIT-9-R AGGCTTGGATTAAGGCGACA    
MIT-10-F ACTGACTATCCTAGAAATCGCTGT 59 741
MIT-10-R GCAGATAGTGAGGAAAGTTGAGC    
MIT-11-F CCACGGACTTCACGTCATTA 59 743
MIT-11-R GGGAGGATATGAGGTGTGAGC    
MIT-12-F GCATTTACCATCTCACTTCTAGG 57 751
MIT-12-R AGTGCGATGAGTAGGGGAAG    
MIT-13-F AGGCACATACTTCCTATTCTACACC 55 740
MIT-13-R TGATATTTGATCAGGAGAACGTG    
MIT-14-F ACTGGGAGAACTCTCTGTGCT 55 740
MIT-14-R ACGAACAATGCTACAGGGATG    
MIT-15-F TCCATAATATTCATCCCTGTAGCA 57 741
MIT-15-R GTGGGTACAGATGTGCAGGA    
MIT-16-F GTTACAATCGGCATCAACCA 55 740
MIT-16-R AGCTTTTCTAGTCAGGTTAGGTCTA    
MIT-17-F CCTCAACCCAAAAAGGCATA 59 745
MIT-17-R GGAGGTCGATGAATGAGTGG    
MIT-18-F ACGCAAAATTAACCCCCTAA 59 742
MIT-18-R GCCTAGGAGGTCTGGTGAGA    
MIT-19-F CCTAGGCGACCCAGACAAT 59 740
MIT-19-R GATAGTTGAGGGTTGATTGCTGTA    
MIT-20-F TGCTTACAAGCAAGTACAGCAAT 57 370
MIT-20-R TGATGTCTTATTTAAGGGGAACG    
MIT-21-F GGCTCACATCACCCCATAAA 55 720
MIT-21-R CATGGGCTACACCTTGACCT    
MIT-22-F GCAAACCCTGATGAAGGCTA 57 632
MIT-22-R GGGGTCTTAGCTTTGGCTCT    
MIT-23-F ACTTTGCAAGGAGAGCCAAA 59 672
MIT-23-R AGGCGGTGCCTCTAATACTG    
MIT-24-F TCACCTCTAGCATCACCAGTATT 57 660
MIT-24-R GGAAGGCGCTTTGTGAAGTA    
HVS-I-F ACT TCA CAA CAA TCC TAA TCC T 60 1200
HVS-I-R CGG AGC GAG GAG AGT AGC AC    
HVS-II-F CAT TTA CCG TAC ATA GCA CA 60 820
HVS-II-R GGG AGG GGG TGA TCT AAA AC