Figure 1. Multiplex ligation probe
amplification strategy to quantify copy number variation across
the regulation of complement activation locus, which is shown in
panel
A. It comprises complement factor H (
CFH)
and the five
CFH related genes (
CFHR1–CFHR5).
Panels
B to
H describe the MLPA assays. The
forward primer (FWP) is attached to the left oligonucleotide
(LO), while the right oligonucleotide (RO) is attached to the
reverse primer (RVP). The oligonucleotide pairs were designed to
hybridize specifically to intron 1 of
CFH (
B),
exon 18 of
CFH (
C), exon 3 of
CFHR3 (
D),
exon 3 of
CFHR1 (
E), exon 2 of
CFHR4 (
F),
intron 3B of
CFHR2 (
G), and exon 7 of
CFHR5
(
H). Capital letters in the wild-type sequence from the
National Center for Biotechnology Information (
NCBI)
correspond to exons, while lower case indicates introns. The
MLPA procedure was described previously [
12].