Table 5 of Mayinu, Mol Vis 2011; 17:1734-1744.


Table 5. Allele and genotype association analysis between the LOXL1 SNPs and different gender of XFS/XFG.

      Genotype count (proportion) Allele count (proportion)
Gender Group rs1048661 (n) TT GT GG χ2 p value G T χ2 p value OR (95%CI)
Male XFS/XFG 41 1 (0.02) 14 (0.34) 26 (0.63) 4.08 0.130 66 (0.80) 16 (0.20) 3.92 0.048 1.90 (1.00–3.59)
  Control 81 10 (0.12) 31 (0.38) 40 (0.49)     111 (0.69) 51 (0.31)      
Female XFS/XFG 23 1 (0.04) 6 (0.26) 16 (0.70) 4.98 0.083 38 (0.83) 8 (0.17) 2.32 0.128 1.97 (0.82–4.78)
  Control 46 1 (0.02) 25 (0.54) 20 (0.43)     65 (0.71) 27 (0.29)      
      Genotype count (proportion) Allele count (proportion)
Gender Group rs2165241 (n) CC CT TT χ2 p value T C χ2 p value OR (95%CI)
Male XFS/XFG 41 12 (0.29) 19 (0.46) 10 (0.24) 9.45 0.009 39 (0.48) 43 (0.52) 10.8 0.001 2.51 (1.44–4.39)
  Control 81 46 (0.57) 27 (0.33) 8 (0.10)     43 (0.27) 119 (0.73)      
Female XFS/XFG 23 2 (0.09) 9 (0.39) 12 (0.52) 27.6 0.000 33 (0.72) 13 (0.28) 34.1 0.000 9.75 (4.31–22.07)
  Control 46 29 (0.63) 15 (0.33) 2 (0.04)     19 (0.21) 73 (0.79)      
      Genotype count (proportion) Allele count (proportion)
Gender Group rs3825942 (n) GG GA AA χ2 p value G A χ2 p value OR (95%CI)
Male XFS/XFG 41 36 (0.88) 5 (0.12) 0 (0.00) 8.41 0.015 77 (0.94) 5 (0.06) 7.89 0.005 3.79 (1.42–10.14)
  Control 81 51 (0.63) 28 (0.35) 2 (0.02)     130 (0.80) 32 (0.20)      
Female XFS/XFG 23 22 (0.96) 1 (0.04) 0 (0.00) 8.46 0.004 45 (0.98) 1 (0.02) 7.19 0.007 10.2 (1.31–79.26)
  Control 46 29 (0.63) 17 (0.37) 0 (0.00)     75 (0.82) 17 (0.18)